Structural Classification of Proteins

Family: Ribosome complexes

Lineage:

Root: scop
Class: Low resolution protein structures [58117]
Not a true class
Fold: Ribosome and ribosomal fragments [58118]
Superfamily: Ribosome and ribosomal fragments [58119]
uperfamily
Family: Ribosome complexes [58120]

Protein Domains:

70S ribosome functional complex [58121]
1. Thermus thermophilus [TaxId: 274] [58122] (48)
  1. 2vqe
    automatically matched to d1gixo_
    complexed with k, mg, par, tm2, zn
    1. region l:5-128 [153436]
  2. 2vqe
    automatically matched to d1eg0f_
    complexed with k, mg, par, tm2, zn
    1. region o:2-89 [153439]
  3. 2vqe
    automatically matched to d1ibkp_
    complexed with k, mg, par, tm2, zn
    1. region p:1-83 [153440]
  4. 2vqe
    automatically matched to d1ibms_
    complexed with k, mg, par, tm2, zn
    1. region s:2-81 [153443]
  5. 2vqf
    automatically matched to d1gixo_
    complexed with k, mg, par, tm2, zn
    1. region l:5-128 [153455]
  6. 2vqf
    automatically matched to d1eg0f_
    complexed with k, mg, par, tm2, zn
    1. region o:2-89 [153458]
  7. 2vqf
    automatically matched to d1ibkp_
    complexed with k, mg, par, tm2, zn
    1. region p:1-83 [153459]
  8. 2vqf
    automatically matched to d1ibms_
    complexed with k, mg, par, tm2, zn
    1. region s:2-81 [153462]
  9. 1ibl
    1. chain b [62186]
    2. chain c [62187]
    3. chain d [62188]
    4. chain e [62189]
    5. chain f [62190]
    6. chain g [62191]
    7. chain h [62192]
    8. chain i [62193]
    9. chain j [62194]
    10. chain k [62195]
    11. chain l [62196]
    12. chain m [62197]
    13. chain n [62198]
    14. chain o [62199]
    15. chain p [62200]
    16. chain q [62201]
    17. chain r [62202]
    18. chain s [62203]
    19. chain t [62204]
    20. chain v [62205]
  10. 2uxd
    automatically matched to d1gixo_
    complexed with k, mg, par, zn
    1. region l:5-128 [152292]
  11. 2uxd
    automatically matched to d1eg0f_
    complexed with k, mg, par, zn
    1. region o:2-89 [152295]
  12. 2uxd
    automatically matched to d1ibkp_
    complexed with k, mg, par, zn
    1. region p:1-83 [152296]
  13. 2uxd
    automatically matched to d1ibms_
    complexed with k, mg, par, zn
    1. region s:2-81 [152299]
  14. 1ibk
    1. chain b [62165]
    2. chain c [62166]
    3. chain d [62167]
    4. chain e [62168]
    5. chain f [62169]
    6. chain g [62170]
    7. chain h [62171]
    8. chain i [62172]
    9. chain j [62173]
    10. chain k [62174]
    11. chain l [62175]
    12. chain m [62176]
    13. chain n [62177]
    14. chain o [62178]
    15. chain p [62179]
    16. chain q [62180]
    17. chain r [62181]
    18. chain s [62182]
    19. chain t [62183]
    20. chain v [62184]
  15. 1ibm
    1. chain b [62207]
    2. chain c [62208]
    3. chain d [62209]
    4. chain e [62210]
    5. chain f [62211]
    6. chain g [62212]
    7. chain h [62213]
    8. chain i [62214]
    9. chain j [62215]
    10. chain k [62216]
    11. chain l [62217]
    12. chain m [62218]
    13. chain n [62219]
    14. chain o [62220]
    15. chain p [62221]
    16. chain q [62222]
    17. chain r [62223]
    18. chain s [62224]
    19. chain t [62225]
    20. chain v [62226]
  16. 3d5a
    automatically matched to d1gixo_
    complexed with mg, zn
    1. region l:4-127 [157346]
  17. 3d5c
    automatically matched to d1gixo_
    complexed with mg, zn
    1. region l:4-127 [157376]
  18. 3d5a
    automatically matched to d1eg0f_
    complexed with mg, zn
    1. region o:2-89 [157348]
  19. 3d5c
    automatically matched to d1eg0f_
    complexed with mg, zn
    1. region o:2-89 [157378]
  20. 3d5a
    automatically matched to d1ibkp_
    complexed with mg, zn
    1. region p:1-83 [157349]
  21. 3d5c
    automatically matched to d1ibkp_
    complexed with mg, zn
    1. region p:1-83 [157379]
  22. 3d5a
    automatically matched to d1ibms_
    complexed with mg, zn
    1. region s:4-81 [157352]
  23. 3d5c
    automatically matched to d1ibms_
    complexed with mg, zn
    1. region s:4-81 [157382]
  24. 2uxb
    automatically matched to d1gixo_
    complexed with k, mg, par, zn
    1. region l:5-128 [152273]
  25. 2uxb
    automatically matched to d1eg0f_
    complexed with k, mg, par, zn
    1. region o:2-89 [152276]
  26. 2uxb
    automatically matched to d1ibkp_
    complexed with k, mg, par, zn
    1. region p:1-83 [152277]
  27. 2uxb
    automatically matched to d1ibms_
    complexed with k, mg, par, zn
    1. region s:2-81 [152280]
  28. 2zkq
    automatically matched to d1eg0f_
    1. region o:1-85 [154600]
  29. 2v46
    automatically matched to d1gixo_
    complexed with 5mu, mg, zn
    1. region l:5-128 [152494]
  30. 2v48
    automatically matched to d1gixo_
    complexed with 5mu, mg, zn
    1. region l:5-128 [152530]
  31. 2v46
    automatically matched to d1eg0f_
    complexed with 5mu, mg, zn
    1. region o:2-89 [152497]
  32. 2v48
    automatically matched to d1eg0f_
    complexed with 5mu, mg, zn
    1. region o:2-89 [152533]
  33. 2v46
    automatically matched to d1ibkp_
    complexed with 5mu, mg, zn
    1. region p:1-83 [152498]
  34. 2v48
    automatically matched to d1ibkp_
    complexed with 5mu, mg, zn
    1. region p:1-83 [152534]
  35. 2v46
    automatically matched to d1ibms_
    complexed with 5mu, mg, zn
    1. region s:4-81 [152501]
  36. 2v48
    automatically matched to d1ibms_
    complexed with 5mu, mg, zn
    1. region s:4-81 [152537]
  37. 1jgq
    1. chain e [62998]
    2. chain f [62999]
    3. chain g [63000]
    4. chain h [63001]
    5. chain i [63002]
    6. chain j [63003]
    7. chain k [63004]
    8. chain l [63005]
    9. chain m [63006]
    10. chain n [63007]
    11. chain o [63008]
    12. chain p [63009]
    13. chain q [63010]
    14. chain r [63011]
    15. chain s [63012]
    16. chain t [63013]
    17. chain u [63014]
    18. chain v [63015]
    19. chain w [63016]
    20. chain x [63017]
  38. 2om7
    automatically matched to d1gixo_
    complexed with 4su, 5mc, 5mu, h2u, psu
    1. region e:5-128 [148866]
  39. 1gix
    1. chain e [60528]
    2. chain f [60529]
    3. chain g [60530]
    4. chain h [60531]
    5. chain i [60532]
    6. chain j [60533]
    7. chain k [60534]
    8. chain l [60535]
    9. chain m [60536]
    10. chain n [60537]
    11. chain o [60538]
    12. chain p [60539]
    13. chain q [60540]
    14. chain r [60541]
    15. chain s [60542]
    16. chain t [60543]
    17. chain u [60544]
    18. chain v [60545]
    19. chain w [60546]
    20. chain x [60547]
  40. 1jgo
    1. chain e [62956]
    2. chain f [62957]
    3. chain g [62958]
    4. chain h [62959]
    5. chain i [62960]
    6. chain j [62961]
    7. chain k [62962]
    8. chain l [62963]
    9. chain m [62964]
    10. chain n [62965]
    11. chain o [62966]
    12. chain p [62967]
    13. chain q [62968]
    14. chain r [62969]
    15. chain s [62970]
    16. chain t [62971]
    17. chain u [62972]
    18. chain v [62973]
    19. chain w [62974]
    20. chain x [62975]
  41. 1giy
    1. chain c [60550]
    2. chain d [60551]
    3. chain e [60552]
    4. chain f [60553]
    5. chain g [60554]
    6. chain h [60555]
    7. chain i [60556]
    8. chain j [60557]
    9. chain k [60558]
    10. chain l [60559]
    11. chain m [60560]
    12. chain n [60561]
    13. chain o [60562]
    14. chain p [60563]
    15. chain q [60564]
    16. chain r [60565]
    17. chain s [60566]
    18. chain t [60567]
    19. chain u [60568]
    20. chain v [60569]
    21. chain w [60570]
    22. chain x [60571]
  42. 1jgp
    1. chain e [62977]
    2. chain f [62978]
    3. chain g [62979]
    4. chain h [62980]
    5. chain i [62981]
    6. chain j [62982]
    7. chain k [62983]
    8. chain l [62984]
    9. chain m [62985]
    10. chain n [62986]
    11. chain o [62987]
    12. chain p [62988]
    13. chain q [62989]
    14. chain r [62990]
    15. chain s [62991]
    16. chain t [62992]
    17. chain u [62993]
    18. chain v [62994]
    19. chain w [62995]
    20. chain x [62996]
  43. 2qnh
    automatically matched to d1eg0f_
    complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
    1. region p:2-89 [150939]
  44. 2qnh
    automatically matched to d1ibkp_
    complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
    1. region q:1-83 [150940]
  45. 2qnh
    automatically matched to d1ibms_
    complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
    1. region t:2-81 [150943]
  46. 2qnh
    automatically matched to d1gixo_
    complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
    1. region m:4-127 [150936]
  47. 1mvr
    1. chain o [85155]
    2. chain l [85154]
  48. 2r1g
    automatically matched to d1gixo_
    1. region h:5-128 [151523]
2. Escherichia coli [TaxId: 562] [58123] (92)
  1. 2qal
    automatically matched to d1p6gh_
    complexed with mg, nmy
    1. region h:2-128 [150221]
  2. 2qan
    automatically matched to d1p6gh_
    complexed with mg, nmy
    1. region h:2-128 [150275]
  3. 2qbf
    automatically matched to d1p6gh_
    complexed with mg
    1. region h:2-128 [150495]
  4. 2qbd
    automatically matched to d1p6gh_
    complexed with mg
    1. region h:2-128 [150441]
  5. 3df1
    automatically matched to d1p6gh_
    complexed with hyg, mg
    1. region h:2-128 [157610]
  6. 3df3
    automatically matched to d1p6gh_
    complexed with hyg, mg
    1. region h:2-128 [157664]
  7. 2qam
    automatically matched to d1p851_
    complexed with mg, nmy, zn
    1. region 1:3-52 [150235]
  8. 2qam
    automatically matched to d1p85n_
    complexed with mg, nmy, zn
    1. region p:1-114 [150256]
  9. 2qoy
    automatically matched to d1p6gh_
    complexed with mg, nmy, scm
    1. region h:2-128 [151098]
  10. 2qp0
    automatically matched to d1p6gh_
    complexed with mg, nmy, scm
    1. region h:2-128 [151151]
  11. 2qao
    automatically matched to d1p851_
    complexed with mg, nmy, zn
    1. region 1:3-52 [150289]
  12. 2qao
    automatically matched to d1p85n_
    complexed with mg, nmy, zn
    1. region p:1-114 [150309]
  13. 2qb9
    automatically matched to d1p6gh_
    complexed with lll, mg
    1. region h:2-128 [150335]
  14. 2qbb
    automatically matched to d1p6gh_
    complexed with lll, mg
    1. region h:2-128 [150388]
  15. 2qbe
    automatically matched to d1p851_
    complexed with mg, zn
    1. region 1:3-52 [150455]
  16. 2qbg
    automatically matched to d1p851_
    complexed with mg, zn
    1. region 1:3-52 [150509]
  17. 2qoz
    automatically matched to d1p851_
    complexed with mg, nmy, zn
    1. region 1:3-52 [151112]
  18. 2qp1
    automatically matched to d1p851_
    complexed with mg, nmy, zn
    1. region 1:3-52 [151165]
  19. 2qbe
    automatically matched to d1p85n_
    complexed with mg, zn
    1. region p:1-114 [150476]
  20. 2qbg
    automatically matched to d1p85n_
    complexed with mg, zn
    1. region p:1-114 [150530]
  21. 2qoz
    automatically matched to d1p85n_
    complexed with mg, nmy, zn
    1. region p:1-114 [151132]
  22. 2qp1
    automatically matched to d1p85n_
    complexed with mg, nmy, zn
    1. region p:1-114 [151185]
  23. 3df2
    automatically matched to d1p851_
    complexed with mg, zn
    1. region 1:3-52 [157625]
  24. 3df4
    automatically matched to d1p851_
    complexed with mg, zn
    1. region 1:3-52 [157679]
  25. 3df2
    automatically matched to d1p85n_
    complexed with mg, zn
    1. region p:1-114 [157645]
  26. 3df4
    automatically matched to d1p85n_
    complexed with mg, zn
    1. region p:1-114 [157699]
  27. 2qbh
    automatically matched to d1p6gh_
    complexed with lll, mg
    1. region h:2-128 [150549]
  28. 2qbj
    automatically matched to d1p6gh_
    complexed with lll, mg
    1. region h:2-128 [150603]
  29. 2qou
    automatically matched to d1p6gh_
    complexed with mg, scm
    1. region h:2-128 [150992]
  30. 2qow
    automatically matched to d1p6gh_
    complexed with mg, scm
    1. region h:2-128 [151045]
  31. 2qba
    automatically matched to d1p851_
    complexed with lll, mg, zn
    1. region 1:3-52 [150349]
  32. 2qbc
    automatically matched to d1p851_
    complexed with lll, mg, zn
    1. region 1:3-52 [150402]
  33. 2qba
    automatically matched to d1p85n_
    complexed with lll, mg, zn
    1. region p:1-114 [150369]
  34. 2qbc
    automatically matched to d1p85n_
    complexed with lll, mg, zn
    1. region p:1-114 [150422]
  35. 2z4m
    automatically matched to d1p6gh_
    complexed with mg, par
    1. region h:2-128 [154113]
  36. 2vho
    automatically matched to d1p6gh_
    complexed with mg
    1. region h:2-128 [153130]
  37. 2z4k
    automatically matched to d1p6gh_
    complexed with mg, par
    1. region h:2-128 [154059]
  38. 2qbi
    automatically matched to d1p851_
    complexed with lll, mg, zn
    1. region 1:3-52 [150563]
  39. 2qbk
    automatically matched to d1p851_
    complexed with lll, mg, zn
    1. region 1:3-52 [150617]
  40. 2qov
    automatically matched to d1p851_
    complexed with mg, zn
    1. region 1:3-52 [151006]
  41. 2qox
    automatically matched to d1p851_
    complexed with mg, zn
    1. region 1:3-52 [151059]
  42. 2qbi
    automatically matched to d1p85n_
    complexed with lll, mg, zn
    1. region p:1-114 [150584]
  43. 2qbk
    automatically matched to d1p85n_
    complexed with lll, mg, zn
    1. region p:1-114 [150638]
  44. 2qov
    automatically matched to d1p85n_
    complexed with mg, zn
    1. region p:1-114 [151026]
  45. 2qox
    automatically matched to d1p85n_
    complexed with mg, zn
    1. region p:1-114 [151079]
  46. 2vhp
    automatically matched to d1p6gh_
    complexed with mg
    1. region h:2-128 [153152]
  47. 2z4l
    automatically matched to d1p851_
    complexed with mg, par, zn
    1. region 1:3-52 [154073]
  48. 2z4n
    automatically matched to d1p851_
    complexed with mg, par, zn
    1. region 1:3-52 [154127]
  49. 2z4l
    automatically matched to d1p85n_
    complexed with mg, par, zn
    1. region p:1-114 [154094]
  50. 2z4n
    automatically matched to d1p85n_
    complexed with mg, par, zn
    1. region p:1-114 [154148]
  51. 2vhm
    automatically matched to d1p851_
    complexed with mg; mutant
    1. region 1:3-52 [153059]
  52. 2vhn
    automatically matched to d1p851_
    complexed with mg
    1. region 1:3-52 [153091]
  53. 2vhm
    automatically matched to d1p85n_
    complexed with mg; mutant
    1. region p:1-114 [153079]
  54. 2vhn
    automatically matched to d1p85n_
    complexed with mg
    1. region p:1-114 [153111]
  55. 1qzc
    S12, sh44, lh69 and srl separately fitted into the cryo-EM map of EF-Tu ternary complex
    1. chain l [96627]
  56. 1r2w
    L11 with 58nts of 23s rRNA fitted into the cryo-em map of the 70S ribosome
    1. chain a [96885]
  57. 1r2x
    L11 with 58nts of 23s rRNA fitted into the cryo-em map of EF-Tu ternary complex
    1. chain a [96887]
  58. 2rdo
    automatically matched to d1p851_
    1. region 1:3-52 [151935]
  59. 2rdo