Structural Classification of Proteins




Family: Ribosomal protein L6
Lineage:
- Root: scop
- Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
- Fold: Ribosomal protein L6 [56052]
consists of two beta-sheets and one alpha-helix packed around single core
- Superfamily: Ribosomal protein L6 [56053]
uperfamily
- Family: Ribosomal protein L6 [56054]
Protein Domains:
- Ribosomal protein L6 [56055]
duplication: consists of two domains of this fold
- Bacillus stearothermophilus [TaxId: 1422] [56056] (9)
- 1rl6

- region a:7-81 [41473]


- region a:82-170 [41474]


- 1yl3






























automatically matched to d1rl6a1
- region h:7-81 [123578]


- 1yl3






























automatically matched to d1rl6a2
- region h:82-170 [123579]


- 2b66























automatically matched to d1rl6a1
- region h:7-81 [127957]


- 2b66























automatically matched to d1rl6a2
- region h:82-170 [127958]


- 2b9n























automatically matched to d1rl6a1
- region h:7-81 [128149]


- 2b9n























automatically matched to d1rl6a2
- region h:82-170 [128150]


- 2b9p























automatically matched to d1rl6a1
- region h:7-81 [128186]


- 2b9p























automatically matched to d1rl6a2
- region h:82-170 [128187]


- Archaeon Haloarcula marismortui [TaxId: 2238] [56057] (61)
SQ P14135
- 1vqo






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
- region e:1-79 [120366]


- 1vqo






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
- region e:80-172 [120367]


- 1vq8






























automatically matched to d1ffk11
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
- region e:1-79 [120192]


- 1vq8






























automatically matched to d1ffk12
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
- region e:80-172 [120193]


- 1vqp






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
- region e:1-79 [120395]


- 1vqp






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
- region e:80-172 [120396]


- 1jj2





























complexed with cd, cl, k, mg, na
- region e:1-79 [63089]


- region e:80-172 [63090]


- 1yhq






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
- region e:1-79 [123187]


- 1yhq






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
- region e:80-172 [123188]


- 1vql






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
- region e:1-79 [120279]


- 1vql






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
- region e:80-172 [120280]


- 1vqk






























automatically matched to d1ffk11
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
- region e:1-79 [120250]


- 1vqk






























automatically matched to d1ffk12
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
- region e:80-172 [120251]


- 1s72






























complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
- region e:1-79 [105323]


- region e:80-172 [105324]


- 1vqm






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
- region e:1-79 [120308]


- 1vqm






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
- region e:80-172 [120309]


- 1vqn






























automatically matched to d1ffk11
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
- region e:1-79 [120337]


- 1vqn






























automatically matched to d1ffk12
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
- region e:80-172 [120338]


- 1yi2






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
- region e:1-79 [123234]


- 1yi2






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
- region e:80-172 [123235]


- 1yij






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
- region e:1-79 [123302]


- 1yij






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
- region e:80-172 [123303]


- 1vq7






























automatically matched to d1ffk11
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
- region e:1-79 [120163]


- 1vq7






























automatically matched to d1ffk12
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
- region e:80-172 [120164]


- 1vq4






























automatically matched to d1ffk11
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
- region e:1-79 [120076]


- 1vq4






























automatically matched to d1ffk12
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
- region e:80-172 [120077]


- 2otl






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
- region e:1-79 [139350]


- 2otl






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
- region e:80-172 [139351]


- 1vq5






























automatically matched to d1ffk11
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
- region e:1-79 [120105]


- 1vq5






























automatically matched to d1ffk12
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
- region e:80-172 [120106]


- 1vq9






























automatically matched to d1ffk11
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
- region e:1-79 [120221]


- 1vq9






























automatically matched to d1ffk12
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
- region e:80-172 [120222]


- 1m90





























complexed with aca, cd, cl, k, mg, na, pha, sps
- region g:1-79 [78844]


- region g:80-172 [78845]


- 1yit






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
- region e:1-79 [123345]


- 1yit






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
- region e:80-172 [123346]


- 1vq6






























automatically matched to d1ffk11
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
- region e:1-79 [120134]


- 1vq6






























automatically matched to d1ffk12
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
- region e:80-172 [120135]


- 2otj






























automatically matched to d1ffk11
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
- region e:1-79 [139321]


- 2otj






























automatically matched to d1ffk12
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
- region e:80-172 [139322]


- 1yjw






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
- region e:1-79 [123469]


- 1yjw






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
- region e:80-172 [123470]


- 1nji





























complexed with cd, cl, clm, k, mg, na; mutant
- region g:1-79 [85797]


- region g:80-172 [85798]


- 1kqs





























complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
- region e:1-79 [68819]


- region e:80-172 [68820]


- 1kc8





























complexed with bls, cd, cl, k, mg, na
- region g:1-79 [84361]


- region g:80-172 [84362]


- 1yjn






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
- region e:1-79 [123437]


- 1yjn






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
- region e:80-172 [123438]


- 1n8r





























complexed with cd, cl, k, mg, na, vir; mutant
- region g:1-79 [85433]


- region g:80-172 [85434]


- 1k73





























complexed with anm, cd, cl, k, mg, na
- region g:1-79 [84322]


- region g:80-172 [84323]


- 1yj9






























automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
- region e:1-79 [123398]


- 1yj9






























automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
- region e:80-172 [123399]


- 1qvg





























complexed with cd, cl, k, mg, na
- region e:1-79 [96396]


- region e:80-172 [96397]


- 1q82





























complexed with cd, cl, k, mg, na, ppu
- region g:1-79 [96133]


- region g:80-172 [96134]


- 1qvf





























complexed with cd, cl, k, mg, na
- region e:1-79 [96366]


- region e:80-172 [96367]


- 1q81





























complexed with cd, cl, k, mg, na, ppu
- region g:1-79 [96103]


- region g:80-172 [96104]


- 1k9m





























complexed with cd, cl, k, mg, na, tyk
- region g:1-79 [72217]


- region g:80-172 [72218]


- 1kd1





























complexed with cd, cl, k, mg, na, spr
- region g:1-79 [72328]


- region g:80-172 [72329]


- 1k8a





























complexed with cai, cd, cl, k, mg, na
- region g:1-79 [72150]


- region g:80-172 [72151]


- 1m1k





























complexed with cd, cl, k, mg, na, zit
- region g:1-79 [74388]


- region g:80-172 [74389]


- 1q86





























complexed with cd, cl, k, mg, na, pha
- region g:1-79 [96171]


- region g:80-172 [96172]


- 1q7y





























complexed with cd, cl, k, mg, na, po4, puy
- region g:1-79 [96069]


- region g:80-172 [96070]


- 1ffk




























CA-atoms only
complexed with cd, k, mo3; mutant
- region 1:1-79 [41475]


- region 1:80-172 [41476]


- Human (Homo sapiens) [TaxId: 9606] [160795] (1)
SQ P32969 1-87
- 2cql

N-terminal domain only
- region a:1-87 [146421]


- Escherichia coli [TaxId: 562] [160796] (54)
SQ P02390 1-81! SQ P02390 82-176
- 2qam
































automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
- region g:1-81 [150244]


- 2qam
































automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
- region g:82-176 [150245]


- 2qao































automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
- region g:1-81 [150297]


- 2qao































automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
- region g:82-176 [150298]


- 2i2t
































automatically matched to 2AW4 G:1-81
complexed with mg, zn
- region g:1-81 [145446]


- 2i2t
































automatically matched to 2AW4 G:82-176
complexed with mg, zn
- region g:82-176 [145447]


- 2i2v
































automatically matched to 2AW4 G:1-81
complexed with mg, zn
- region g:1-81 [145488]


- 2i2v
































automatically matched to 2AW4 G:82-176
complexed with mg, zn
- region g:82-176 [145489]


- 2qbe
































automatically matched to 2AW4 G:1-81
complexed with mg, zn
- region g:1-81 [150464]


- 2qbe
































automatically matched to 2AW4 G:82-176
complexed with mg, zn
- region g:82-176 [150465]


- 2qbg
































automatically matched to 2AW4 G:1-81
complexed with mg, zn
- region g:1-81 [150518]


- 2qbg
































automatically matched to 2AW4 G:82-176
complexed with mg, zn
- region g:82-176 [150519]


- 2qoz































automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
- region g:1-81 [151120]


- 2qoz































automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
- region g:82-176 [151121]


- 2qp1































automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
- region g:1-81 [151173]


- 2qp1































automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
- region g:82-176 [151174]


- 3df2































automatically matched to 2AW4 G:1-81
complexed with mg, zn
- region g:1-81 [157633]


- 3df2































automatically matched to 2AW4 G:82-176
complexed with mg, zn
- region g:82-176 [157634]


- 3df4































automatically matched to 2AW4 G:1-81
complexed with mg, zn
- region g:1-81 [157687]


- 3df4































automatically matched to 2AW4 G:82-176
complexed with mg, zn
- region g:82-176 [157688]


- 2qba































automatically matched to 2AW4 G:1-81
complexed with lll, mg, zn
- region g:1-81 [150357]


- 2qba































automatically matched to 2AW4 G:82-176
complexed with lll, mg, zn
- region g:82-176 [150358]


- 2qbc































automatically matched to 2AW4 G:1-81
complexed with lll, mg, zn
- region g:1-81 [150410]


- 2qbc







