Class: All alpha proteins

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]

Folds:

1. Globin-like [46457] (1)
   1. Globin-like [46458] (1)
2. Long alpha-hairpin [46556] (3)
   1. GreA transcript cleavage protein, N-terminal domain [46557] (1)
   2. Chaperone J-domain [46565] (1)
   3. Epsilon subunit of F1F0-ATP synthase C-terminal domain [46604] (1)
3. LEM/SAP HeH motif [63450] (1)
   1. Rho termination factor, N-terminal domain [68912] (1)
4. Cytochrome c [46625] (1)
   1. Cytochrome c [46626] (1)
5. DNA/RNA-binding 3-helical bundle [46688] (6)
   1. Homeodomain-like [46689] (5)
   2. Methylated DNA-protein cysteine methyltransferase, C-terminal domain [46767] (1)
   3. "Winged helix" DNA-binding domain [46785] (11)
   4. C-terminal effector domain of the bipartite response regulators [46894] (2)
   5. TrpR-like [48295] (1)
   6. Ribosomal protein L11, C-terminal domain [46906] (1)
6. Another 3-helical bundle [81602] (1)
   1. Protein serine/threonine phosphatase 2C, C-terminal domain [81601] (1)
7. RuvA C-terminal domain-like [46928] (2)
   1. DNA helicase RuvA subunit, C-terminal domain [46929] (1)
   2. CRAL/TRIO N-terminal domain [46938] (1)
8. Putative DNA-binding domain [46954] (1)
   1. Putative DNA-binding domain [46955] (2)
9. Spectrin repeat-like [46965] (1)
   1. Spectrin repeat [46966] (1)
10. immunoglobulin/albumin-binding domain-like [46996] (1)
    1. Bacterial immunoglobulin/albumin-binding domains [46997] (2)
11. Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex [47004] (1)
    1. Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex [47005] (1)
12. Protozoan pheromone-like [47013] (1)
    1. Protozoan pheromone proteins [47014] (1)
13. Acyl-CoA binding protein-like [47026] (1)
    1. Acyl-CoA binding protein [47027] (1)
14. alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 [47044] (1)
    1. alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 [47045] (1)
15. VHP, Villin headpiece domain [47049] (1)
    1. VHP, Villin headpiece domain [47050] (1)
16. S15/NS1 RNA-binding domain [47059] (1)
    1. S15/NS1 RNA-binding domain [47060] (2)
17. T4 endonuclease V [47076] (1)
    1. T4 endonuclease V [47077] (1)
18. Fertilization protein [47081] (1)
    1. Fertilization protein [47082] (1)
19. PGBD-like [47089] (1)
    1. PGBD-like [47090] (2)
20. HMG-box [47094] (1)
    1. HMG-box [47095] (1)
21. Histone-fold [47112] (1)
    1. Histone-fold [47113] (1)
22. Four-helical up-and-down bundle [47161] (6)
    1. Apolipoprotein [47162] (1)
    2. Aspartate receptor, ligand-binding domain [47170] (1)
    3. Cytochromes [47175] (2)
    4. Hemerythrin [47188] (1)
    5. Histidine-containing phosphotransfer domain, HPT domain [47226] (1)
    6. Domain of the SRP/SRP receptor G-proteins [47364] (1)
23. Ferritin-like [47239] (1)
    1. Ferritin-like [47240] (2)
24. 4-helical cytokines [47265] (1)
    1. 4-helical cytokines [47266] (3)
25. Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47322] (1)
    1. Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47323] (1)
26. Acyl carrier protein-like [47335] (3)
    1. ACP-like [47336] (1)
    2. Colicin E immunity proteins [47345] (1)
    3. Retrovirus capsid protein C-terminal domain [47353] (1)
27. ROP-like [47379] (1)
    1. ROP protein [47380] (1)
28. lambda repressor-like DNA-binding domains [47412] (1)
    1. lambda repressor-like DNA-binding domains [47413] (3)
29. EF Hand-like [47472] (2)
    1. EF-hand [47473] (6)
    2. Cloroperoxidase [47571] (1)
30. CH domain-like [47575] (1)
    1. Calponin-homology domain, CH-domain [47576] (1)
31. Domain of poly(ADP-ribose) polymerase [47586] (1)
    1. Domain of poly(ADP-ribose) polymerase [47587] (1)
32. Glutathione S-transferase (GST), C-terminal domain [47615] (1)
    1. Glutathione S-transferase (GST), C-terminal domain [47616] (1)
33. Methionine synthase domain-like [47643] (1)
    1. Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain [47648] (1)
34. Anaphylotoxins (complement system) [47685] (1)
    1. Anaphylotoxins (complement system) [47686] (1)
35. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47698] (1)
    1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47699] (2)
36. p53 tetramerization domain [47718] (1)
    1. p53 tetramerization domain [47719] (1)
37. Domain of early E2A DNA-binding protein, ADDBP [47723] (1)
    1. Domain of early E2A DNA-binding protein, ADDBP [47724] (1)
38. Chemotaxis receptor methyltransferase CheR, N-terminal domain [47756] (1)
    1. Chemotaxis receptor methyltransferase CheR, N-terminal domain [47757] (1)
39. SAM domain-like [47768] (8)
    1. SAM/Pointed domain [47769] (2)
    2. RuvA domain 2-like [47781] (1)
    3. C-terminal domain of RNA polymerase alpha subunit [47789] (1)
    4. DNA polymerase beta, N-terminal domain-like [47802] (1)
    5. DNA polymerase beta-like, second domain [81585] (1)
    6. 5' to 3' exonuclease, C-terminal subdomain [47807] (1)
    7. lambda integrase-like, N-terminal domain [47823] (1)
    8. Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain [47831] (1)
40. Retroviral matrix proteins [47835] (1)
    1. Retroviral matrix proteins [47836] (4)
41. Apolipophorin-III [47856] (1)
    1. Apolipophorin-III [47857] (1)
42. Saposin-like [47861] (1)
    1. Saposin [47862] (1)
43. Annexin [47873] (1)
    1. Annexin [47874] (1)
44. Transducin (alpha subunit), insertion domain [47894] (1)
    1. Transducin (alpha subunit), insertion domain [47895] (1)
45. N-terminal domain of the delta subunit of the F1F0-ATP synthase [47927] (1)
    1. N-terminal domain of the delta subunit of the F1F0-ATP synthase [47928] (1)
46. Retrovirus capsid protein, N-terminal core domain [47942] (1)
    1. Retrovirus capsid protein, N-terminal core domain [47943] (1)
47. Cyclin-like [47953] (1)
    1. Cyclin-like [47954] (3)
48. Ribosomal protein S7 [47972] (1)
    1. Ribosomal protein S7 [47973] (1)
49. DNA polymerase III clamp loader subunits, C-terminal domain [48018] (1)
    1. DNA polymerase III clamp loader subunits, C-terminal domain [48019] (1)
50. Iron-dependent repressor protein, dimerization domain [47978] (1)
    1. Iron-dependent repressor protein, dimerization domain [47979] (1)
51. DEATH domain [47985] (1)
    1. DEATH domain [47986] (3)
52. Guanido kinase N-terminal domain [48033] (1)
    1. Guanido kinase N-terminal domain [48034] (1)
53. Hemocyanin, N-terminal domain [48049] (1)
    1. Hemocyanin, N-terminal domain [48050] (1)
54. Di-copper centre-containing domain [48055] (1)
    1. Di-copper centre-containing domain [48056] (1)
55. Transcription factor STAT-4 N-domain [48091] (1)
    1. Transcription factor STAT-4 N-domain [48092] (1)
56. Heme-dependent peroxidases [48112] (1)
    1. Heme-dependent peroxidases [48113] (2)
57. DNA-glycosylase [48149] (1)
    1. DNA-glycosylase [48150] (2)
58. An anticodon-binding domain of class I aminoacyl-tRNA synthetases [48162] (1)
    1. An anticodon-binding domain of class I aminoacyl-tRNA synthetases [48163] (1)
59. R1 subunit of ribonucleotide reductase, N-terminal domain [48167] (1)
    1. R1 subunit of ribonucleotide reductase, N-terminal domain [48168] (1)
60. Cryptochrome/photolyase FAD-binding domain [48172] (1)
    1. Cryptochrome/photolyase FAD-binding domain [48173] (1)
61. 6-phosphogluconate dehydrogenase C-terminal domain-like [48178] (1)
    1. 6-phosphogluconate dehydrogenase C-terminal domain-like [48179] (3)
62. Uteroglobin-like [48200] (1)
    1. Uteroglobin-like [48201] (1)
63. alpha/alpha toroid [48207] (2)
    1. Six-hairpin glycosidases [48208] (2)
    2. Terpenoid cyclases/Protein prenyltransferases [48239] (3)
64. Citrate synthase [48255] (1)
    1. Citrate synthase [48256] (1)
65. Cytochrome P450 [48263] (1)
    1. Cytochrome P450 [48264] (1)
66. Acid phosphatase/Vanadium-dependent haloperoxidase [48316] (1)
    1. Acid phosphatase/Vanadium-dependent haloperoxidase [48317] (1)
67. H-NS histone-like proteins [81274] (1)
    1. H-NS histone-like proteins [81273] (1)
68. Sigma2 domain of RNA polymerase sigma factors [88945] (1)
    1. Sigma2 domain of RNA polymerase sigma factors [88946] (1)
69. GTPase activation domain, GAP [48349] (1)
    1. GTPase activation domain, GAP [48350] (2)
70. alpha-alpha superhelix [48370] (4)
    1. ARM repeat [48371] (2)
    2. Sec7 domain [48425] (1)
    3. Bacterial muramidases [48435] (1)
    4. TPR-like [48452] (1)
71. Lipoxigenase [48483] (1)
    1. Lipoxigenase [48484] (2)
72. Tetracyclin repressor-like, C-terminal domain [48497] (1)
    1. Tetracyclin repressor-like, C-terminal domain [48498] (1)
73. Nuclear receptor ligand-binding domain [48507] (1)
    1. Nuclear receptor ligand-binding domain [48508] (1)
74. Phospholipase C/P1 nuclease [48536] (1)
    1. Phospholipase C/P1 nuclease [48537] (2)
75. Serum albumin-like [48551] (1)
    1. Serum albumin-like [48552] (1)
76. L-aspartase-like [48556] (1)
    1. L-aspartase-like [48557] (1)
77. Terpenoid synthases [48575] (1)
    1. Terpenoid synthases [48576] (2)
78. GroEL equatorial domain-like [48591] (1)
    1. GroEL equatorial domain-like [48592] (1)
79. Cysteine alpha-hairpin motif [47071] (1)
    1. Cysteine alpha-hairpin motif [47072] (1)
80. Phospholipase A2, PLA2 [48618] (1)
    1. Phospholipase A2, PLA2 [48619] (2)
81. Fungal elicitin [48646] (1)
    1. Fungal elicitin [48647] (1)
82. Multiheme cytochromes [48694] (1)
    1. Multiheme cytochromes [48695] (2)

Generated from scop database # 1.71_1.73 history with scopm 1.101 on Wed Nov 21 12:55:38 2007 Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk