Structural Classification of Proteins
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Changes in domain definitions and classification
Release 1.69 ---> 1.71

Root: scop

Classes:

  1. All alpha proteins [46456] (4)
    1. Long alpha-hairpin [46556] (1)
      1. Theta subunit of DNA polymerase III [46575] (1)
        1. Theta subunit of DNA polymerase III [46576] (1)
          1. Theta subunit of DNA polymerase III [46577]
            1. Escherichia coli [46578] (1)
              1. 1du2 picpic
                cl=same,cf=116730,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [15701] picpic
    2. DNA/RNA-binding 3-helical bundle [46688] (1)
      1. Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (1)
        1. Sigma4 domain [88665] (1)
          1. Sigma factor SigA [88668]
            1. Thermus aquaticus [88669] (4)
              1. 1ku3 picpic
                cl=same,cf=same,sf=same,fa=same,dm=88666,sp=same,px=same
                1. chain a [73000] picpic
              2. 1ku7 picpic
                cl=same,cf=same,sf=same,fa=same,dm=88666,sp=same,px=same
                1. chain a [73001] picpic
              3. 1ku7 picpic
                cl=same,cf=same,sf=same,fa=same,dm=88666,sp=same,px=same
                1. chain d [73002] picpic
              4. 1rio picpic
                cl=same,cf=same,sf=same,fa=same,dm=88666,sp=same,px=same
                1. chain h [97515] picpic
    3. Hypothetical protein Aq 328 [101316] (1)
      1. Hypothetical protein Aq 328 [101317] (1)
        1. Hypothetical protein Aq 328 [101318] (1)
          1. Hypothetical protein Aq 328 [101319]
            1. Aquifex aeolicus [101320] (1)
              1. 1r4v picpic
                cl=same,cf=47112,sf=47113,fa=same,dm=same,sp=same,px=same
                1. chain a [97049] picpic
    4. Porin chaperone SurA, peptide-binding domain [81826] (1)
      1. Porin chaperone SurA, peptide-binding domain [81827] (1)
        1. Porin chaperone SurA, peptide-binding domain [81828] (1)
          1. Porin chaperone SurA, peptide-binding domain [81829]
            1. Escherichia coli [81830] (4)
              1. 1m5y picpic
                cl=same,cf=109997,sf=109998,fa=same,dm=same,sp=same,px=same
                1. region a:25-164,a:395-427 [78664] picpic
              2. 1m5y picpic
                cl=same,cf=109997,sf=109998,fa=same,dm=same,sp=same,px=same
                1. region b:25-163,b:396-427 [78667] picpic
              3. 1m5y picpic
                cl=same,cf=109997,sf=109998,fa=same,dm=same,sp=same,px=same
                1. region c:25-163,c:396-427 [78670] picpic
              4. 1m5y picpic
                cl=same,cf=109997,sf=109998,fa=same,dm=same,sp=same,px=same
                1. region d:25-163,d:396-428 [78673] picpic
  2. All beta proteins [48724] (6)
    1. Immunoglobulin-like beta-sandwich [48725] (1)
      1. Immunoglobulin [48726] (1)
        1. V set domains (antibody variable domain-like) [48727] (3)
          1. Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
            1. Human (Homo sapiens), cluster 1 [88520] (1)
              1. 1jv5 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=88533,px=same
                1. chain a [67344] picpic
            2. Mouse (Mus musculus), cluster 4 [88531] (2)
              1. 1pg7 picpic
                cl=same,cf=same,sf=same,fa=same,dm=88543,sp=88552,px=same
                1. region x:1-113 [94684] picpic
              2. 1pg7 picpic
                cl=same,cf=same,sf=same,fa=same,dm=88543,sp=88552,px=same
                1. region z:1-113 [94688] picpic
          2. Immunoglobulin heavy chain variable domain, VH [88543]
            1. Human (Homo sapiens), cluster 1 [88544] (1)
              1. 1jv5 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=88562,px=same
                1. chain b [67345] picpic
    2. Virus attachment protein globular domain [49834] (1)
      1. Virus attachment protein globular domain [49835] (1)
        1. Reovirus attachment protein sigma 1 head domain [69225] (1)
          1. Reovirus attachment protein sigma 1 head domain [69226]
            1. Reovirus [69227] (3)
              1. 1kke picpicxrefxrefxref
                cl=same,cf=51224,sf=51225,fa=69356,dm=69357,sp=69358,px=same
                1. region a:250-312 [68669] picpic
              2. 1kke picpicxrefxrefxref
                cl=same,cf=51224,sf=51225,fa=69356,dm=69357,sp=69358,px=same
                1. region b:251-312 [68671] picpic
              3. 1kke picpicxrefxrefxref
                cl=same,cf=51224,sf=51225,fa=69356,dm=69357,sp=69358,px=same
                1. region c:250-312 [68673] picpic
    3. OB-fold [50198] (1)
      1. Nucleic acid-binding proteins [50249] (1)
        1. Cold shock DNA-binding domain-like [50282] (2)
          1. Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain [74950]
            1. Human (Homo sapiens) [74951] (2)
              1. 1kl9 picpic
                cl=46456,cf=47768,sf=116742,fa=116743,dm=116744,sp=116745,px=111574
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111575
                1. chain a [72681] picpic
              2. 1q8k picpic
                cl=46456,cf=47768,sf=116742,fa=116743,dm=116744,sp=116745,px=111596
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111597
                1. region a:3-185 [104556] picpic
            2. Baker's yeast (Saccharomyces cerevisiae) [101764] (1)
              1. 1q46 picpic
                cl=46456,cf=47768,sf=116742,fa=116743,dm=116744,sp=116746,px=111594
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111595
                1. chain a [95782] picpic
    4. Elongation factor/aminomethyltransferase common domain [50464] (1)
      1. Aminomethyltransferase beta-barrel domain [101790] (1)
        1. Aminomethyltransferase beta-barrel domain [101791] (1)
          1. Glycine cleavage system T protein, GcvT [110231]
            1. Escherichia coli [110233] (1)
              1. 1vlo picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region a:268-367 [108838] picpic
    5. Double psi beta-barrel [50684] (1)
      1. ADC-like [50692] (1)
        1. Cdc48 N-terminal domain-like [50708] (1)
          1. Peroxisome biogenesis factor 1 (PEX-1), N-terminal domain [110252]
            1. Mouse (Mus musculus) [110253] (1)
              1. 1wlf picpicxref
                cl=53931,cf=54584,sf=54585,fa=54586,dm=110874,sp=110875,px=same
                1. region a:100-179 [109396] picpic
    6. Triple beta-spiral [51224] (1)
      1. Fibre shaft of virus attachment proteins [51225] (1)
        1. Reovirus attachment protein sigma 1 [69356] (1)
          1. Reovirus attachment protein sigma 1 [69357]
            1. Reovirus [69358] (3)
              1. 1kke picpicxrefxrefxref
                cl=same,cf=49834,sf=49835,fa=69225,dm=69226,sp=69227,px=same
                1. region a:313-455 [68670] picpic
              2. 1kke picpicxrefxrefxref
                cl=same,cf=49834,sf=49835,fa=69225,dm=69226,sp=69227,px=same
                1. region b:313-455 [68672] picpic
              3. 1kke picpicxrefxrefxref
                cl=same,cf=49834,sf=49835,fa=69225,dm=69226,sp=69227,px=same
                1. region c:313-455 [68674] picpic
  3. Alpha and beta proteins (a/b) [51349] (9)
    Mainly parallel beta sheets (beta-alpha-beta units)
    1. NAD(P)-binding Rossmann-fold domains [51734] (1)
      1. NAD(P)-binding Rossmann-fold domains [51735] (1)
        1. Potassium channel NAD-binding domain [63944] (1)
          1. Potassium channel-related protein MthK [75122]
            1. Archaeon Methanothermobacter thermautotrophicus [75123] (8)
              1. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111576
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111577
                1. region a:116-336 [74049] picpic
              2. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111578
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111579
                1. region b:116-336 [74051] picpic
              3. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111580
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111581
                1. region c:116-336 [74053] picpic
              4. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111582
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111583
                1. region d:116-336 [74055] picpic
              5. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111584
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111585
                1. region e:116-336 [74057] picpic
              6. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111586
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111587
                1. region f:116-336 [74059] picpic
              7. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111588
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111589
                1. region g:116-336 [74061] picpic
              8. 1lnq picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111590
                cl=53931,cf=116725,sf=116726,fa=116727,dm=116728,sp=116729,px=111591
                1. region h:116-336 [74063] picpic
    2. Hypothetical protein PA1492 [110459] (1)
      1. Hypothetical protein PA1492 [110460] (1)
        1. Hypothetical protein PA1492 [110461] (1)
          1. Hypothetical protein PA1492 [110462]
            1. Pseudomonas aeruginosa [110463] (2)
              1. 1t1j picpic
                cl=same,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [106249] picpic
              2. 1t1j picpic
                cl=same,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [106250] picpic
    3. Ribonuclease H-like motif [53066] (1)
      1. Actin-like ATPase domain [53067] (1)
        1. Acetate kinase [53080] (1)
          1. Acetate kinase [53081]
            1. Archaeon Methanosarcina thermophila [53082] (4)
              1. 1g99 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region a:1-156 [33457] picpic
              2. 1g99 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region a:157-398 [33458] picpic
              3. 1g99 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:1-156 [33459] picpic
              4. 1g99 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:157-398 [33460] picpic
    4. Hypothetical protein TM1506 [110649] (1)
      1. Hypothetical protein TM1506 [110650] (1)
        1. Hypothetical protein TM1506 [110651] (1)
          1. Hypothetical protein TM1506 [110652]
            1. Thermotoga maritima [110653] (1)
              1. 1vk9 picpic
                cl=same,cf=53926,sf=53927,fa=same,dm=same,sp=same,px=same
                1. chain a [108640] picpic
    5. S-adenosyl-L-methionine-dependent methyltransferases [53334] (1)
      1. S-adenosyl-L-methionine-dependent methyltransferases [53335] (2)
        1. DNA methylase TaqI [88787] (1)
          1. DNA methylase TaqI [53369]
            1. Thermus aquaticus [53370] (8)
              1. 1aqi picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111559
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111560
                1. chain a [34240] picpic
              2. 1aqi picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111561
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111562
                1. chain b [34241] picpic
              3. 1aqj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111563
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111564
                1. chain a [34242] picpic
              4. 1aqj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111565
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111566
                1. chain b [34243] picpic
              5. 1g38 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111567
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111568
                1. chain a [60235] picpic
              6. 1g38 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111569
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111570
                1. chain d [60236] picpic
              7. 2adm picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111611
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111612
                1. chain a [34238] picpic
              8. 2adm picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111613
                cl=53931,cf=116733,sf=116734,fa=116735,dm=116736,sp=116737,px=111614
                1. chain b [34239] picpic
        2. Mycolic acid cyclopropane synthase [69560] (1)
          1. CmaA1 [69561]
            1. Mycobacterium tuberculosis [69562] (1)
              1. 1kpi picpic
                cl=same,cf=same,sf=same,fa=same,dm=116723,sp=116724,px=same
                1. chain a [68743] picpic
    6. Dihydrofolate reductases [53596] (1)
      1. Dihydrofolate reductases [53597] (1)
        1. Dihydrofolate reductases [53598] (1)
          1. Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain [53610]
            1. Cryptosporidium hominis [110705] (5)
              1. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=102636,px=same
                1. region a:3-180 [105455] picpic
              2. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=102636,px=same
                1. region b:3-180 [105457] picpic
              3. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=102636,px=same
                1. region c:3-180 [105459] picpic
              4. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=102636,px=same
                1. region d:3-180 [105461] picpic
              5. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=102636,px=same
                1. region e:3-180 [105463] picpic
    7. Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1)
      1. Isocitrate/Isopropylmalate dehydrogenase-like [53659] (1)
        1. Phosphotransacetylase [102663] (1)
          1. Putative phosphotransacetylase SPy1128 [102664]
            1. Streptococcus pyogenes [102665] (2)
              1. 1r5j picpic
                cl=same,cf=same,sf=same,fa=same,dm=110717,sp=same,px=same
                1. chain a [97097] picpic
              2. 1r5j picpic
                cl=same,cf=same,sf=same,fa=same,dm=110717,sp=same,px=same
                1. chain b [97098] picpic
    8. ATC-like [53670] (1)
      1. Aspartate/ornithine carbamoyltransferase [53671] (1)
        1. Aspartate/ornithine carbamoyltransferase [53672] (1)
          1. Aspartate carbamoyltransferase catalytic subunit [53673]
            1. Escherichia coli [53674] (4)
              1. 1tth picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111601
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111602
                1. region a:1-150,a:151-310 [107297] picpic
              2. 1tth picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111603
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111604
                1. region c:1-150,c:151-310 [107300] picpic
              3. 1tu0 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111605
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111606
                1. region a:1-150,a:151-310 [107310] picpic
              4. 1tu0 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111607
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111608
                1. region c:1-150,c:151-310 [107313] picpic
    9. Cytidine deaminase-like [53926] (1)
      1. AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC [64197] (1)
        1. AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC [64198] (2)
          1. AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC [64199]
            1. Chicken (Gallus gallus) [64200] (8)
              1. 1g8m picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-593 [60372] picpic
              2. 1g8m picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-593 [60374] picpic
              3. 1m9n picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-593 [78871] picpic
              4. 1m9n picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-593 [78873] picpic
              5. 1oz0 picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-593 [93777] picpic
              6. 1oz0 picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-593 [93779] picpic
              7. 1thz picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-593 [106922] picpic
              8. 1thz picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-593 [106924] picpic
            2. Human (Homo sapiens) [102716] (10)
              1. 1p4r picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-592 [94114] picpic
              2. 1p4r picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-592 [94116] picpic
              3. 1pkx picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-592 [94839] picpic
              4. 1pkx picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-592 [94841] picpic
              5. 1pkx picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region c:201-592 [94843] picpic
              6. 1pkx picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region d:201-592 [94845] picpic
              7. 1pl0 picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region a:201-592 [94847] picpic
              8. 1pl0 picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region b:201-592 [94849] picpic
              9. 1pl0 picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region c:201-592 [94851] picpic
              10. 1pl0 picpic
                cl=same,cf=same,sf=53927,fa=same,dm=same,sp=same,px=same
                1. region d:201-592 [94853] picpic
  4. Alpha and beta proteins (a+b) [53931] (9)
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
    1. Cdc48 domain 2-like [54584] (1)
      1. Cdc48 domain 2-like [54585] (1)
        1. Cdc48 domain 2-like [54586] (1)
          1. Peroxisome biogenesis factor 1 (PEX-1), domain 2 [110874]
            1. Mouse (Mus musculus) [110875] (1)
              1. 1wlf picpicxref
                cl=48724,cf=50684,sf=50692,fa=50708,dm=110252,sp=110253,px=same
                1. region a:13-99 [109397] picpic
    2. alpha/beta-Hammerhead [54664] (1)
      1. Nicotinate/Quinolinate PRTase C-terminal domain-like [54675] (1)
        1. Nicotinate phosphoribosyltransferase, C-terminal domain [110910] (1)
          1. Nicotinate phosphoribosyltransferase, C-terminal domain [110911]
            1. Baker's yeast (Saccharomyces cerevisiae) [110912] (4)
              1. 1vlp picpic
                cl=51349,cf=51350,sf=51690,fa=same,dm=same,sp=same,px=same
                1. region a:150-415 [108841] picpic
              2. 1vlp picpic
                cl=51349,cf=51350,sf=51690,fa=same,dm=same,sp=same,px=same
                1. region b:150-415 [108843] picpic
              3. 1vlp picpic
                cl=51349,cf=51350,sf=51690,fa=same,dm=same,sp=same,px=same
                1. region c:150-415 [108845] picpic
              4. 1vlp picpic
                cl=51349,cf=51350,sf=51690,fa=same,dm=same,sp=same,px=same
                1. region d:150-415 [108847] picpic
    3. Aminomethyltransferase folate-binding domain [103024] (1)
      1. Aminomethyltransferase folate-binding domain [103025] (1)
        1. Aminomethyltransferase folate-binding domain [103026] (1)
          1. Glycine cleavage system T protein, GcvT [111012]
            1. Escherichia coli [111014] (1)
              1. 1vlo picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region a:4-267 [108839] picpic
    4. T-fold [55619] (1)
      1. Tetrahydrobiopterin biosynthesis enzymes-like [55620] (1)
        1. Urate oxidase (uricase) [55633] (1)
          1. Urate oxidase (uricase) [55634]
            1. Bacillus sp., strain TB-90 [111089] (3)
              1. 1j2g picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111571
                1. region a:159-312 [103828] picpic
              2. 1j2g picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111572
                1. region a:159-312 [103828] picpic
              3. 1j2g picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111573
                1. region a:159-312 [103828] picpic
    5. Nudix [55810] (1)
      1. Nudix [55811] (1)
        1. NADH pyrophosphatase [103214] (1)
          1. NADH pyrophosphatase [103215]
            1. Escherichia coli [103216] (1)
              1. 1vk6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111609
                cl=56992,cf=57769,sf=116738,fa=116739,dm=116740,sp=116741,px=111610
                1. region a:0-125 [100851] picpic
    6. Thymidylate synthase/dCMP hydroxymethylase [55830] (1)
      1. Thymidylate synthase/dCMP hydroxymethylase [55831] (1)
        1. Thymidylate synthase/dCMP hydroxymethylase [55832] (1)
          1. Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain [55841]
            1. Cryptosporidium hominis [111138] (5)
              1. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=100887,px=same
                1. region a:233-521 [105456] picpic
              2. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=100887,px=same
                1. region b:233-521 [105458] picpic
              3. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=100887,px=same
                1. region c:233-521 [105460] picpic
              4. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=100887,px=same
                1. region d:233-521 [105462] picpic
              5. 1sej picpicxrefxrefxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=100887,px=same
                1. region e:233-521 [105464] picpic
    7. B3/B4 domain of PheRS, PheT [56036] (1)
      1. B3/B4 domain of PheRS, PheT [56037] (1)
        1. B3/B4 domain of PheRS, PheT [56038] (1)
          1. B3/B4 domain of PheRS, PheT [56039]
            1. Thermus thermophilus (Thermus aquaticus) [56040] (5)
              1. 1b70 picpic
                cl=48724,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:191-399 [41457] picpic
              2. 1b7y picpic
                cl=48724,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:191-399 [41456] picpic
              3. 1eiy picpic
                cl=48724,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:191-399 [41458] picpic
              4. 1jjc picpic
                cl=48724,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:191-399 [66764] picpic
              5. 1pys picpic
                cl=48724,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:191-399 [41455] picpic
    8. C-type lectin-like [56435] (1)
      1. C-type lectin-like [56436] (1)
        1. C-type lectin domain [56437] (2)
          1. DC-SIGN (dendritic cell-specific ICAM-3 grabbing nonintegrin) [69855]
            1. Human (Homo sapiens) [69856] (6)
              1. 1sl6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=69857,sp=69858,px=same
                1. chain a [105712] picpic
              2. 1sl6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=69857,sp=69858,px=same
                1. chain b [105713] picpic
              3. 1sl6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=69857,sp=69858,px=same
                1. chain c [105714] picpic
              4. 1sl6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=69857,sp=69858,px=same
                1. chain d [105715] picpic
              5. 1sl6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=69857,sp=69858,px=same
                1. chain e [105716] picpic
              6. 1sl6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=69857,sp=69858,px=same
                1. chain f [105717] picpic
          2. E-selectin [56456]
            1. Human (Homo sapiens) [56457] (10)
              1. 1g1q picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region a:1-118 [65084] picpic
              2. 1g1q picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region b:1-118 [65086] picpic
              3. 1g1q picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region c:1-118 [65088] picpic
              4. 1g1q picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region d:1-118 [65090] picpic
              5. 1g1r picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region a:1-118 [65092] picpic
              6. 1g1r picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region b:1-118 [65094] picpic
              7. 1g1r picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region c:1-118 [65096] picpic
              8. 1g1r picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region d:1-118 [65098] picpic
              9. 1g1s picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region a:1-118 [65100] picpic
              10. 1g1s picpic
                cl=same,cf=same,sf=same,fa=same,dm=116731,sp=116732,px=same
                1. region b:1-118 [65102] picpic
    9. Putative cell cycle protein MesJ, middle and C-terminal domain [82828] (1)
      1. Putative cell cycle protein MesJ, middle and C-terminal domain [82829] (1)
        1. Putative cell cycle protein MesJ, middle and C-terminal domain [82830] (1)
          1. Putative cell cycle protein MesJ, middle and C-terminal domain [82831]
            1. Escherichia coli [82832] (1)
              1. 1ni5 picpic
                cl=48724,cf=56036,sf=56037,fa=116720,dm=116721,sp=116722,px=111592
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=111593
                1. region a:227-432 [80534] picpic
  5. Multi-domain proteins (alpha and beta) [56572] (1)
    Folds consisting of two or more domains belonging to different classes
    1. ADP ribosyl cyclase-like [56628] (1)
      1. ADP ribosyl cyclase-like [56629] (1)
        1. ADP ribosyl cyclase-like [56630] (2)
          1. ADP ribosyl cyclase [56631]
            1. Sea hare (Aplysia californica) [56632] (16)
              1. 1lbe picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [42773] picpic
              2. 1lbe picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [42774] picpic
              3. 1r0s picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [96737] picpic
              4. 1r0s picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [96738] picpic
              5. 1r12 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [96780] picpic
              6. 1r12 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [96781] picpic
              7. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [96786] picpic
              8. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [96787] picpic
              9. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain c [96788] picpic
              10. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain d [96789] picpic
              11. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain e [96790] picpic
              12. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain f [96791] picpic
              13. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain g [96792] picpic
              14. 1r15 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain h [96793] picpic
              15. 1r16 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [96794] picpic
              16. 1r16 picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [96795] picpic
          2. Bone marror stromal cell antigen 1, BST-1/CD157 (ADP ribosyl cyclase-2) [75597]
            1. Human (Homo sapiens) [75598] (12)
              1. 1isf picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [71388] picpic
              2. 1isf picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [71389] picpic
              3. 1isg picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [71390] picpic
              4. 1isg picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [71391] picpic
              5. 1ish picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [71392] picpic
              6. 1ish picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [71393] picpic
              7. 1isi picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [71394] picpic
              8. 1isi picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [71395] picpic
              9. 1isj picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [71396] picpic
              10. 1isj picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [71397] picpic
              11. 1ism picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain a [71398] picpic
              12. 1ism picpic
                cl=51349,cf=52171,sf=52309,fa=same,dm=same,sp=same,px=same
                1. chain b [71399] picpic
  6. Membrane and cell surface proteins and peptides [56835] (0)
    Does not include proteins in the immune system
  7. Small proteins [56992] (0)
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  8. Coiled coil proteins [57942] (1)
    Not a true class
    1. Antiparallel coiled-coil [58086] (2)
      1. Arfaptin, Rac-binding fragment [64598] (1)
        1. Arfaptin, Rac-binding fragment [64599] (1)
          1. Arfaptin, Rac-binding fragment [64600]
            1. Human (Homo sapiens) [64601] (8)
              1. 1i49 picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain a [61679] picpic
              2. 1i49 picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain b [61680] picpic
              3. 1i4d picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain a [61682] picpic
              4. 1i4d picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain b [61683] picpic
              5. 1i4l picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain a [61718] picpic
              6. 1i4l picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain b [61719] picpic
              7. 1i4t picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain a [61729] picpic
              8. 1i4t picpic
                cl=46456,cf=116747,sf=103657,fa=same,dm=same,sp=same,px=same
                1. chain b [61730] picpic
      2. BAR domain [103657] (1)
        1. BAR domain [103658] (1)
          1. Amphiphysin [103659]
            1. Fruit fly (Drosophila melanogaster) [103660] (1)
              1. 1uru picpic
                cl=46456,cf=116747,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [99835] picpic
  9. Low resolution protein structures [58117] (0)
    Not a true class
  10. Peptides [58231] (0)
    Peptides and fragments. Not a true class
  11. Designed proteins [58788] (0)
    Experimental structures of proteins with essentially non-natural sequences. Not a true class
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MRC site Generated from scop database 1.69_1.71 history with scopm 1.101 on Fri Oct 20 14:13:34 2006
Copyright © 1994-2005 The scop authors / scop@mrc-lmb.cam.ac.uk