Root: scop

Classes:

1. All alpha proteins [46456] (4)
   1. Spectrin repeat-like [46965] (1)
   2. HD domain [101338] (1)
   3. Nuclear receptor ligand-binding domain [48507] (1)
   4. PDEase [48546] (1)
2. All beta proteins [48724] (2)
   1. C2 domain-like [49561] (1)
   2. Double-stranded beta-helix [51181] (1)
3. Alpha and beta proteins (a/b) [51349] (4)
   Mainly parallel beta sheets (beta-alpha-beta units)
   1. TIM beta/alpha-barrel [51350] (2)
   2. Tubulin/Dihydroxyacetone kinase nucleotide-binding domain [52489] (1)
   3. PRTase-like [53270] (1)
   4. Thiolase-like [53900] (1)
4. Alpha and beta proteins (a+b) [53931] (6)
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
   1. Pili subunits [54522] (1)
   2. FKBP-like [54533] (1)
   3. Transcription-state regulator AbrB, the N-terminal DNA recognition domain [54741] (1)
   4. Ferredoxin-like [54861] (2)
   5. RPB5-like RNA polymerase subunit [55286] (1)
   6. Bacillus chorismate mutase-like [55297] (1)
5. Multi-domain proteins (alpha and beta) [56572] (1)
   Folds consisting of two or more domains belonging to different classes
   1. DNA-binding domain of intron endonuclease I-TevI [64495] (1)
6. Membrane and cell surface proteins and peptides [56835] (0)
   Does not include proteins in the immune system
7. Small proteins [56992] (0)
   Usually dominated by metal ligand, heme, and/or disulfide bridges
8. Coiled coil proteins [57942] (0)
   Not a true class
9. Low resolution protein structures [58117] (0)
   Not a true class
10. Peptides [58231] (0)
    Peptides and fragments. Not a true class
11. Designed proteins [58788] (0)
    Experimental structures of proteins with essentially non-natural sequences. Not a true class

Generated from scop database 1.67_1.69 history with scopm 1.101 on Fri Jul 29 14:29:31 2005 Copyright © 1994-2005 The scop authors / scop@mrc-lmb.cam.ac.uk