Structural Classification of Proteins
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Changes in domain definitions and classification
Release 1.67 ---> 1.69

Root: scop

Classes:

  1. All alpha proteins [46456] (4)
    1. Spectrin repeat-like [46965] (1)
      1. Typo IV secretion system protein TraC [101082] (1)
        1. Typo IV secretion system protein TraC [101083] (1)
          1. Typo IV secretion system protein TraC [101084]
            1. Escherichia coli [101085] (1)
              1. 1r8i picpic
                cl=same,cf=46996,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [97239] picpic
    2. HD domain [101338] (1)
      1. HD domain [101339] (1)
        1. HD domain [101340] (1)
          1. Stringent response-like protein RelA N-terminal domain [101341]
            1. Streptococcus equisimilis [101342] (2)
              1. 1vj7 picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. region a:5-196 [100801] picpic
              2. 1vj7 picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. region b:5-196 [100803] picpic
    3. Nuclear receptor ligand-binding domain [48507] (1)
      1. Nuclear receptor ligand-binding domain [48508] (1)
        1. Nuclear receptor ligand-binding domain [48509] (1)
          1. Hepatocyte nuclear factor 4-gamma [81918]
            1. Rat (Rattus norvegicus) [89146] (4)
              1. 1m7w picpic
                cl=same,cf=same,sf=same,fa=same,dm=109605,sp=same,px=same
                1. chain a [84869] picpic
              2. 1m7w picpic
                cl=same,cf=same,sf=same,fa=same,dm=109605,sp=same,px=same
                1. chain b [84870] picpic
              3. 1m7w picpic
                cl=same,cf=same,sf=same,fa=same,dm=109605,sp=same,px=same
                1. chain c [84871] picpic
              4. 1m7w picpic
                cl=same,cf=same,sf=same,fa=same,dm=109605,sp=same,px=same
                1. chain d [84872] picpic
    4. PDEase [48546] (1)
      1. PDEase [48547] (1)
        1. PDEase [48548] (4)
          1. Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b [48549]
            1. Human (Homo sapiens) [48550] (2)
              1. 1f0j picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [19346] picpic
              2. 1f0j picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [19347] picpic
          2. Catalytic domain of cyclic nucleotide phosphodiesterase pde4d [89151]
            1. Human (Homo sapiens) [89152] (28)
              1. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [84982] picpic
              2. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [84983] picpic
              3. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [84984] picpic
              4. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [84985] picpic
              5. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain e [84986] picpic
              6. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain f [84987] picpic
              7. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain g [84988] picpic
              8. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain h [84989] picpic
              9. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain i [84990] picpic
              10. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain j [84991] picpic
              11. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain k [84992] picpic
              12. 1mkd picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain l [84993] picpic
              13. 1oyn picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [87609] picpic
              14. 1oyn picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [87610] picpic
              15. 1oyn picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [87611] picpic
              16. 1oyn picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [87612] picpic
              17. 1ptw picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [95106] picpic
              18. 1ptw picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [95107] picpic
              19. 1ptw picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [95108] picpic
              20. 1ptw picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [95109] picpic
              21. 1q9m picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [96288] picpic
              22. 1q9m picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [96289] picpic
              23. 1q9m picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [96290] picpic
              24. 1q9m picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [96291] picpic
              25. 1rko picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [97616] picpic
              26. 1rko picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [97617] picpic
              27. 1rko picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [97618] picpic
              28. 1rko picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [97619] picpic
          3. cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx [101439]
            1. Human (Homo sapiens) [101440] (4)
              1. 1rkp picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [97620] picpic
              2. 1udt picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [99221] picpic
              3. 1udu picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [99222] picpic
              4. 1udu picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [99223] picpic
          4. cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b [101441]
            1. Human (Homo sapiens) [101442] (16)
              1. 1so2 picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [98936] picpic
              2. 1so2 picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [98937] picpic
              3. 1so2 picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [98938] picpic
              4. 1so2 picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [98939] picpic
              5. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain a [98942] picpic
              6. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain b [98943] picpic
              7. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain c [98944] picpic
              8. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain d [98945] picpic
              9. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain e [98946] picpic
              10. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain f [98947] picpic
              11. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain g [98948] picpic
              12. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain h [98949] picpic
              13. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain i [98950] picpic
              14. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain j [98951] picpic
              15. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain k [98952] picpic
              16. 1soj picpic
                cl=same,cf=109603,sf=109604,fa=same,dm=same,sp=same,px=same
                1. chain l [98953] picpic
  2. All beta proteins [48724] (2)
    1. C2 domain-like [49561] (1)
      1. C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (1)
        1. Synaptotagmin-like (S variant) [49575] (1)
          1. Synaptogamin I [49576]
            1. Rat (Rattus norvegicus) [49577] (2)
              1. 1dqv picpic
                cl=same,cf=same,sf=same,fa=same,dm=109606,sp=109607,px=same
                1. region a:295-424 [23194] picpic
              2. 1dqv picpic
                cl=same,cf=same,sf=same,fa=same,dm=109606,sp=109607,px=same
                1. region a:425-569 [23195] picpic
    2. Double-stranded beta-helix [51181] (1)
      1. RmlC-like cupins [51182] (1)
        1. Germin/Seed storage 7S protein [51187] (1)
          1. Seed storage 7S protein [51188]
            1. Soybean (Glycine max), beta-conglycinin [75032] (12)
              1. 1ipj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region a:9-176 [71258] picpic
              2. 1ipj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region a:183-393 [71259] picpic
              3. 1ipj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region b:9-175 [71260] picpic
              4. 1ipj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region b:186-393 [71261] picpic
              5. 1ipj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region c:9-177 [71262] picpic
              6. 1ipj picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region c:181-393 [71263] picpic
              7. 1ipk picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region a:8-174 [71264] picpic
              8. 1ipk picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region a:183-392 [71265] picpic
              9. 1ipk picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region b:9-174 [71266] picpic
              10. 1ipk picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region b:183-392 [71267] picpic
              11. 1ipk picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region c:3-180 [71268] picpic
              12. 1ipk picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109608,px=same
                1. region c:181-392 [71269] picpic
  3. Alpha and beta proteins (a/b) [51349] (4)
    Mainly parallel beta sheets (beta-alpha-beta units)
    1. TIM beta/alpha-barrel [51350] (2)
      1. NAD(P)-linked oxidoreductase [51430] (1)
        1. Aldo-keto reductases (NADP) [51431] (1)
          1. 3-alpha-hydroxysteroid dehydrogenase [51439]
            1. Human (Homo sapiens), type III [69383] (1)
              1. 1mrq picpic
                cl=same,cf=same,sf=same,fa=same,dm=109609,sp=109610,px=same
                1. chain a [91445] picpic
      2. (Trans)glycosidases [51445] (1)
        1. Type II chitinase [51534] (1)
          1. Mammary gland protein (MGP-40) [89480]
            1. Goat (Capra hircus) [89481] (1)
              1. 1sv8 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109611,px=same
                1. region a:1-239,a:308-362 [99019] picpic
    2. Tubulin/Dihydroxyacetone kinase nucleotide-binding domain [52489] (1)
      1. Tubulin/Dihydroxyacetone kinase nucleotide-binding domain [52490] (1)
        1. Dihydroxyacetone kinase ATPase domain [89640] (2)
          1. Dihydroxyacetone kinase subunit K, DhaK [89641]
            1. Escherichia coli [89642] (4)
              1. 1oi2 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103802
                1. region a:20-178 [87039] picpic
              2. 1oi2 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103803
                1. region b:20-178 [87041] picpic
              3. 1oi3 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103804
                1. region a:20-178 [87043] picpic
              4. 1oi3 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103805
                1. region b:20-178 [87045] picpic
          2. Dihydroxyacetone kinase [102296]
            1. Citrobacter freundii [102297] (4)
              1. 1un8 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103806
                1. region a:1-170 [99662] picpic
              2. 1un8 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103807
                1. region b:1-170 [99665] picpic
              3. 1un9 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103808
                1. region a:1-170 [99668] picpic
              4. 1un9 picpicxrefxref
                cl=same,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103809
                1. region b:1-170 [99671] picpic
    3. PRTase-like [53270] (1)
      1. PRTase-like [53271] (1)
        1. Phosphoribosyltransferases (PRTases) [53272] (2)
          1. Uracil PRTase [53293]
            1. Bacillus subtilis [53294] (3)
              1. 1a3c picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
              2. 1a4x picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
                1. chain a [34096] picpic
              3. 1a4x picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
                1. chain b [34097] picpic
            2. Thermus thermophilus [102537] (4)
              1. 1ufr picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
                1. chain a [99354] picpic
              2. 1ufr picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
                1. chain b [99355] picpic
              3. 1ufr picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
                1. chain c [99356] picpic
              4. 1ufr picpic
                cl=same,cf=same,sf=same,fa=same,dm=109612,sp=same,px=same
                1. chain d [99357] picpic
    4. Thiolase-like [53900] (1)
      1. Thiolase-like [53901] (1)
        1. Thiolase-related [53902] (4)
          1. Ketoacyl-ACP synthase III (FabH) [53912]
            1. Escherichia coli [53913] (18)
              1. 1ebl picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [35973] picpic
              2. 1ebl picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [35974] picpic
              3. 1ebl picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:1-174 [35975] picpic
              4. 1ebl picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:175-317 [35976] picpic
              5. 1hn9 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [35977] picpic
              6. 1hn9 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [35978] picpic
              7. 1hn9 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:1001-1174 [35979] picpic
              8. 1hn9 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:1175-1317 [35980] picpic
              9. 1hnd picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [35971] picpic
              10. 1hnd picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [35972] picpic
              11. 1hnh picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [35983] picpic
              12. 1hnh picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [35984] picpic
              13. 1hnj picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [35969] picpic
              14. 1hnj picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [35970] picpic
              15. 1hnk picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [35981] picpic
              16. 1hnk picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [35982] picpic
              17. 1mzs picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:1-174 [79711] picpic
              18. 1mzs picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [79712] picpic
            2. Mycobacterium tuberculosis [64196] (8)
              1. 1hzp picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:-10-174 [61455] picpic
              2. 1hzp picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:175-317 [61456] picpic
              3. 1hzp picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:-10-174 [61457] picpic
              4. 1hzp picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:175-317 [61458] picpic
              5. 1m1m picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:2-185 [74409] picpic
              6. 1m1m picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:186-333 [74410] picpic
              7. 1m1m picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:5-185 [74411] picpic
              8. 1m1m picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:186-333 [74412] picpic
            3. Thermus thermophilus [89794] (8)
              1. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:2-173 [88402] picpic
              2. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:174-322 [88403] picpic
              3. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:2-173 [88404] picpic
              4. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:174-322 [88405] picpic
              5. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region c:2-173 [88406] picpic
              6. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region c:174-322 [88407] picpic
              7. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region d:2-173 [88408] picpic
              8. 1ub7 picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region d:174-322 [88409] picpic
          2. Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway [82561]
            1. Streptomyces sp. r1128 [82562] (4)
              1. 1mzj picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:3-183 [79700] picpic
              2. 1mzj picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region a:184-336 [79701] picpic
              3. 1mzj picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:2-183 [79702] picpic
              4. 1mzj picpic
                cl=same,cf=same,sf=same,fa=53914,dm=same,sp=same,px=same
                1. region b:184-335 [79703] picpic
  4. Alpha and beta proteins (a+b) [53931] (6)
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
    1. Pili subunits [54522] (1)
      1. Pili subunits [54523] (1)
        1. Pilin [54524] (3)
          1. Pilin [54525]
            1. Gc (Neisseria gonorrhoeae) [54526] (2)
              1. 1ay2 picpic
                cl=same,cf=same,sf=same,fa=same,dm=109618,sp=same,px=same
              2. 2pil picpic
                cl=same,cf=same,sf=same,fa=same,dm=109618,sp=same,px=same
            2. Pseudomonas aeruginosa [64247] (1)
              1. 1hpw picpic
                cl=same,cf=same,sf=same,fa=same,dm=109619,sp=same,px=same
                1. chain a [61118] picpic
            3. Pseudomonas aeruginosa, type IV pilin, pak pilin [54527] (3)
              1. 1dzo picpic
                cl=same,cf=same,sf=same,fa=same,dm=109620,sp=same,px=same
                1. chain a [38378] picpic
              2. 1oqw picpic
                cl=same,cf=same,sf=same,fa=same,dm=109620,sp=same,px=same
                1. chain a [87323] picpic
              3. 1oqw picpic
                cl=same,cf=same,sf=same,fa=same,dm=109620,sp=same,px=same
                1. chain b [87324] picpic
    2. FKBP-like [54533] (1)
      1. Chitinase insertion domain [54556] (1)
        1. Chitinase insertion domain [54557] (1)
          1. Mammary gland protein (MGP-40) [89882]
            1. Goat (Capra hircus) [89883] (1)
              1. 1sv8 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=109621,px=same
                1. region a:240-307 [99020] picpic
    3. Transcription-state regulator AbrB, the N-terminal DNA recognition domain [54741] (1)
      1. Transcription-state regulator AbrB, the N-terminal DNA recognition domain [54742] (1)
        1. Transcription-state regulator AbrB, the N-terminal DNA recognition domain [54743] (1)
          1. Transcription-state regulator AbrB, the N-terminal DNA recognition domain [54744]
            1. Bacillus subtilis [54745] (2)
              1. 1ekt picpic
                cl=48724,cf=89446,sf=89447,fa=same,dm=same,sp=same,px=same
                1. chain a [38764] picpic
              2. 1ekt picpic
                cl=48724,cf=89446,sf=89447,fa=same,dm=same,sp=same,px=same
                1. chain b [38765] picpic
    4. Ferredoxin-like [54861] (2)
      1. 4Fe-4S ferredoxins [54862] (2)
        1. Short-chain ferredoxins [54863] (1)
          1. Ferredoxin II [54864]
            1. Desulfovibrio gigas [54865] (2)
              1. 1f2g picpic
                cl=same,cf=same,sf=same,fa=54877,dm=54880,sp=same,px=same
              2. 1fxd picpic
                cl=same,cf=same,sf=same,fa=54877,dm=54880,sp=same,px=same
        2. Single 4Fe-4S cluster ferredoxin [54877] (2)
          1. Photosystem I iron-sulfur protein PsaC [64272]
            1. Synechococcus elongatus [64273] (1)
              1. 1jb0 picpic
                cl=same,cf=same,sf=same,fa=54870,dm=same,sp=same,px=same
                1. chain c [62822] picpic
            2. Synechococcus sp. pcc 7002 [75426] (1)
              1. 1k0t picpic
                cl=same,cf=same,sf=same,fa=54870,dm=same,sp=same,px=same
                1. chain a [71976] picpic
      2. PurS subunit of FGAM synthetase [82697] (1)
        1. PurS subunit of FGAM synthetase [82698] (1)
          1. PurS subunit of FGAM synthetase [82699]
            1. Archaeon Methanobacterium thermoautotrophicum [82700] (2)
              1. 1gtd picpic
                cl=same,cf=109622,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [76344] picpic
              2. 1gtd picpic
                cl=same,cf=109622,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [76345] picpic
    5. RPB5-like RNA polymerase subunit [55286] (1)
      1. RPB5-like RNA polymerase subunit [55287] (1)
        1. RPB6 [55294] (2)
          1. RPB6 [55295]
            1. Human (Homo sapiens) [55296] (1)
              1. 1qkl picpic
                cl=46456,cf=63561,sf=63562,fa=same,dm=same,sp=same,px=same
                1. chain a [39754] picpic
            2. Baker's yeast (Saccharomyces cerevisiae) [64318] (4)
              1. 1i3q picpic
                cl=46456,cf=63561,sf=63562,fa=same,dm=same,sp=same,px=same
                1. chain f [61613] picpic
              2. 1i50 picpic
                cl=46456,cf=63561,sf=63562,fa=same,dm=same,sp=same,px=same
                1. chain f [61760] picpic
              3. 1i6h picpic
                cl=46456,cf=63561,sf=63562,fa=same,dm=same,sp=same,px=same
                1. chain f [61837] picpic
              4. 1k83 picpic
                cl=46456,cf=63561,sf=63562,fa=same,dm=same,sp=same,px=same
                1. chain f [68281] picpic
    6. Bacillus chorismate mutase-like [55297] (1)
      1. Tubulin/Dihydroxyacetone kinase C-terminal domain [55307] (1)
        1. Dihydroxyacetone kinase C-terminal domain [89983] (2)
          1. Dihydroxyacetone kinase subunit K, DhaK [89984]
            1. Escherichia coli [89985] (4)
              1. 1oi2 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103802
                1. region a:179-368 [87040] picpic
              2. 1oi2 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103803
                1. region b:179-368 [87042] picpic
              3. 1oi3 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103804
                1. region a:179-368 [87044] picpic
              4. 1oi3 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109614,sp=109615,px=103805
                1. region b:179-368 [87046] picpic
          2. Dihydroxyacetone kinase [103079]
            1. Citrobacter freundii [103080] (4)
              1. 1un8 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103806
                1. region a:171-335 [99663] picpic
              2. 1un8 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103807
                1. region b:171-335 [99666] picpic
              3. 1un9 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103808
                1. region a:171-335 [99669] picpic
              4. 1un9 picpicxrefxref
                cl=51349,cf=82548,sf=82549,fa=109613,dm=109616,sp=109617,px=103809
                1. region b:171-335 [99672] picpic
  5. Multi-domain proteins (alpha and beta) [56572] (1)
    Folds consisting of two or more domains belonging to different classes
    1. DNA-binding domain of intron endonuclease I-TevI [64495] (1)
      1. DNA-binding domain of intron endonuclease I-TevI [64496] (1)
        1. DNA-binding domain of intron endonuclease I-TevI [64497] (1)
          1. DNA-binding domain of intron endonuclease I-TevI [64498]
            1. Bacteriophage T4 [64499] (1)
              1. 1i3j picpic
                cl=53931,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [61594] picpic
  6. Membrane and cell surface proteins and peptides [56835] (0)
    Does not include proteins in the immune system
  7. Small proteins [56992] (0)
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  8. Coiled coil proteins [57942] (0)
    Not a true class
  9. Low resolution protein structures [58117] (0)
    Not a true class
  10. Peptides [58231] (0)
    Peptides and fragments. Not a true class
  11. Designed proteins [58788] (0)
    Experimental structures of proteins with essentially non-natural sequences. Not a true class
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MRC site Generated from scop database 1.67_1.69 history with scopm 1.101 on Fri Jul 29 14:29:31 2005
Copyright © 1994-2005 The scop authors / scop@mrc-lmb.cam.ac.uk