Structural Classification of Proteins
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Changes in domain definitions and classification
Release 1.59 ---> 1.61

Root: scop

Classes:

  1. All alpha proteins [46456] (4)
    1. DNA/RNA-binding 3-helical bundle [46688] (1)
      1. ARID-like domain [46774] (1)
        1. MRF-2 DNA-binding domain [46778] (1)
          1. MRF-2 DNA-binding domain [46779]
            1. Human (Homo sapiens) [46780] (1)
              1. 1ig6 picpic
                cl=same,cf=same,sf=same,fa=46775,dm=same,sp=same,px=same
                1. chain a [62364] picpic
    2. FliG C-terminal domain [48028] (1)
      1. FliG C-terminal domain [48029] (1)
        1. FliG C-terminal domain [48030] (1)
          1. FliG C-terminal domain [48031]
            1. Thermotoga maritima [48032] (2)
              1. 1qc7 picpic
                cl=same,cf=48370,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [18456] picpic
              2. 1qc7 picpic
                cl=same,cf=48370,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [18457] picpic
    3. alpha-alpha superhelix [48370] (1)
      1. Ankyrin repeat [48403] (1)
        1. Ankyrin repeat [48404] (12)
          1. 53BP2 [48405]
            1. Human (Homo sapiens) [48406] (1)
              1. 1ycs picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. region b:327-456 [19155] picpic
          2. GA bindinig protein (GABP) beta 1 [48407]
            1. Mouse (Mus musculus) [48408] (1)
              1. 1awc picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19156] picpic
          3. Cell cycle inhibitor p19ink4D [48409]
            1. Human (Homo sapiens) [48410] (3)
              1. 1bd8 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
              2. 1bi8 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19158] picpic
              3. 1bi8 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain d [19159] picpic
            2. Mouse (Mus musculus) [48411] (1)
              1. 1blx picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19160] picpic
          4. p18ink4C(ink6) [48412]
            1. Human (Homo sapiens) [48413] (5)
              1. 1bu9 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [19165] picpic
              2. 1g3n picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19163] picpic
              3. 1g3n picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain f [19164] picpic
              4. 1ihb picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [19161] picpic
              5. 1ihb picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19162] picpic
          5. Cell cycle inhibitor p16ink4A [48414]
            1. Human (Homo sapiens) [48415] (4)
              1. 1a5e picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
              2. 1bi7 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19166] picpic
              3. 1dc2 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [19168] picpic
              4. 2a5e picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
            2. Mouse (Mus musculus) [48416] (1)
              1. 1ap7 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
          6. I-kappa-B-alpha [48417]
            1. Human (Homo sapiens) [48418] (3)
              1. 1ikn picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain d [19171] picpic
              2. 1nfi picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain e [19172] picpic
              3. 1nfi picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain f [19173] picpic
          7. bcl-3 [69091]
            1. Human (Homo sapiens) [69092] (2)
              1. 1k1a picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [67992] picpic
              2. 1k1b picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [67993] picpic
          8. Myotrophin [48419]
            1. Rat (Rattus norvegicus) [48420] (2)
              1. 1myo picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
              2. 2myo picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
          9. Swi6 ankyrin-repeat fragment [48421]
            1. Baker's yeast (Saccharomyces cerevisiae) [48422] (2)
              1. 1sw6 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain a [19176] picpic
              2. 1sw6 picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. chain b [19177] picpic
          10. Pyk2-associated protein beta [48423]
            1. Mouse (Mus musculus) [48424] (1)
              1. 1dcq picpic
                cl=53931,cf=74651,sf=same,fa=same,dm=same,sp=same,px=same
                1. region a:369-522 [19178] picpic
    4. Phospholipase A2, PLA2 [48618] (1)
      1. Phospholipase A2, PLA2 [48619] (1)
        1. Vertebrate phospholipase A2 [48623] (4)
          1. beta2-bungarotoxin, phospholipase A2 chain [48641]
            1. Many-banded krait (Bungarus multicinctus), elapid [48642] (1)
              1. 1bun picpic
                cl=same,cf=same,sf=same,fa=same,dm=48624,sp=same,px=same
                1. chain a [19614] picpic
          2. Myotoxin II [48643]
            1. Terciopelo (Bothrops asper) [48644] (2)
              1. 1clp picpic
                cl=same,cf=same,sf=same,fa=same,dm=48624,sp=same,px=same
                1. chain a [19615] picpic
              2. 1clp picpic
                cl=same,cf=same,sf=same,fa=same,dm=48624,sp=same,px=same
                1. chain b [19616] picpic
            2. Bothrops godmani [48645] (1)
              1. 1god picpic
                cl=same,cf=same,sf=same,fa=same,dm=48624,sp=same,px=same
                1. chain a [19617] picpic
            3. Snake (Bothrops pirajai), piratoxin III [69123] (2)
              1. 1gmz picpic
                cl=same,cf=same,sf=same,fa=same,dm=48624,sp=same,px=same
                1. chain a [65356] picpic
              2. 1gmz picpic
                cl=same,cf=same,sf=same,fa=same,dm=48624,sp=same,px=same
                1. chain b [65357] picpic
  2. All beta proteins [48724] (3)
    1. Concanavalin A-like lectins/glucanases [49898] (1)
      1. Concanavalin A-like lectins/glucanases [49899] (1)
        1. Calnexin/calreticulin [69236] (1)
          1. Calnexin [69237]
            1. Dog (Canis familiaris) [69238] (2)
              1. 1jhn picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=70060
                modified domain definition: A:412-458 -> A:61-262,A:412-458 [70060]
                1. region a:412-458 [66721] picpic
              2. 1jhn picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=70060
                modified domain definition: A:61-262 -> A:61-262,A:412-458 [70060]
                1. region a:61-262 [66720] picpic
    2. Supersandwich [49993] (3)
      1. beta-Galactosidase, domain 5 [49994] (1)
        1. beta-Galactosidase, domain 5 [49995] (1)
          1. beta-Galactosidase, domain 5 [49996]
            1. Escherichia coli [49997] (124)
              1. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [24358] picpic
              2. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [24359] picpic
              3. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [24360] picpic
              4. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [24361] picpic
              5. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region e:731-1023 [24362] picpic
              6. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region f:731-1023 [24363] picpic
              7. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region g:731-1023 [24364] picpic
              8. 1bgl picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region h:731-1023 [24365] picpic
              9. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region i:731-1023 [24350] picpic
              10. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region j:731-1023 [24351] picpic
              11. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region k:731-1023 [24352] picpic
              12. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region l:731-1023 [24353] picpic
              13. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region m:731-1023 [24354] picpic
              14. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region n:731-1023 [24355] picpic
              15. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region o:731-1023 [24356] picpic
              16. 1bgm picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region p:731-1023 [24357] picpic
              17. 1dp0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [24346] picpic
              18. 1dp0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [24347] picpic
              19. 1dp0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [24348] picpic
              20. 1dp0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [24349] picpic
              21. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [24366] picpic
              22. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [24367] picpic
              23. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [24368] picpic
              24. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [24369] picpic
              25. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region e:731-1023 [24370] picpic
              26. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region f:731-1023 [24371] picpic
              27. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region g:731-1023 [24372] picpic
              28. 1f49 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region h:731-1023 [24373] picpic
              29. 1f4a picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [24382] picpic
              30. 1f4a picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [24383] picpic
              31. 1f4a picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [24384] picpic
              32. 1f4a picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [24385] picpic
              33. 1f4h picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [24386] picpic
              34. 1f4h picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [24387] picpic
              35. 1f4h picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [24388] picpic
              36. 1f4h picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [24389] picpic
              37. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region i:731-1023 [24374] picpic
              38. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region j:731-1023 [24375] picpic
              39. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region k:731-1023 [24376] picpic
              40. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region l:731-1023 [24377] picpic
              41. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region m:731-1023 [24378] picpic
              42. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region n:731-1023 [24379] picpic
              43. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region o:731-1023 [24380] picpic
              44. 1gho picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region p:731-1023 [24381] picpic
              45. 1hn1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [65873] picpic
              46. 1hn1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [65878] picpic
              47. 1hn1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [65883] picpic
              48. 1hn1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [65888] picpic
              49. 1jyn picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67466] picpic
              50. 1jyn picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67471] picpic
              51. 1jyn picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67476] picpic
              52. 1jyn picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67481] picpic
              53. 1jyv picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67493] picpic
              54. 1jyv picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67498] picpic
              55. 1jyv picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67503] picpic
              56. 1jyv picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67508] picpic
              57. 1jyw picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67513] picpic
              58. 1jyw picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67518] picpic
              59. 1jyw picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67523] picpic
              60. 1jyw picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67528] picpic
              61. 1jyx picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67533] picpic
              62. 1jyx picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67538] picpic
              63. 1jyx picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67543] picpic
              64. 1jyx picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67548] picpic
              65. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67553] picpic
              66. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67558] picpic
              67. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67563] picpic
              68. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67568] picpic
              69. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region e:731-1023 [67573] picpic
              70. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region f:731-1023 [67578] picpic
              71. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region g:731-1023 [67583] picpic
              72. 1jyy picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region h:731-1023 [67588] picpic
              73. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region i:731-1023 [67593] picpic
              74. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region j:731-1023 [67598] picpic
              75. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region k:731-1023 [67603] picpic
              76. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region l:731-1023 [67608] picpic
              77. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region m:731-1023 [67613] picpic
              78. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region n:731-1023 [67618] picpic
              79. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region o:731-1023 [67623] picpic
              80. 1jyz picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region p:731-1023 [67628] picpic
              81. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67633] picpic
              82. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67638] picpic
              83. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67643] picpic
              84. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67648] picpic
              85. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region e:731-1023 [67653] picpic
              86. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region f:731-1023 [67658] picpic
              87. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region g:731-1023 [67663] picpic
              88. 1jz0 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region h:731-1023 [67668] picpic
              89. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region i:731-1023 [67673] picpic
              90. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region j:731-1023 [67678] picpic
              91. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region k:731-1023 [67683] picpic
              92. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region l:731-1023 [67688] picpic
              93. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region m:731-1023 [67693] picpic
              94. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region n:731-1023 [67698] picpic
              95. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region o:731-1023 [67703] picpic
              96. 1jz1 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region p:731-1023 [67708] picpic
              97. 1jz2 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67713] picpic
              98. 1jz2 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67718] picpic
              99. 1jz2 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67723] picpic
              100. 1jz2 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67728] picpic
              101. 1jz3 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67733] picpic
              102. 1jz3 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67738] picpic
              103. 1jz3 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67743] picpic
              104. 1jz3 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67748] picpic
              105. 1jz4 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67753] picpic
              106. 1jz4 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67758] picpic
              107. 1jz4 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67763] picpic
              108. 1jz4 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67768] picpic
              109. 1jz5 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67773] picpic
              110. 1jz5 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67778] picpic
              111. 1jz5 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67783] picpic
              112. 1jz5 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67788] picpic
              113. 1jz6 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67793] picpic
              114. 1jz6 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67798] picpic
              115. 1jz6 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67803] picpic
              116. 1jz6 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67808] picpic
              117. 1jz7 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67813] picpic
              118. 1jz7 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67818] picpic
              119. 1jz7 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67823] picpic
              120. 1jz7 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67828] picpic
              121. 1jz8 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:731-1023 [67833] picpic
              122. 1jz8 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:731-1023 [67838] picpic
              123. 1jz8 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region c:731-1023 [67843] picpic
              124. 1jz8 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region d:731-1023 [67848] picpic
      2. Hyaluronate lyase-like, central domain [50005] (1)
        1. Hyaluronate lyase-like, central domain [50006] (3)
          1. Chondroitinase AC [50007]
            1. Pedobacter heparinus (Flavobacterium heparinum) [50008] (5)
              1. 1cb8 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:336-599 [24422] picpic
              2. 1hm2 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:336-599 [61085] picpic
              3. 1hm3 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:336-599 [61088] picpic
              4. 1hmu picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:336-599 [61091] picpic
              5. 1hmw picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:336-599 [61094] picpic
          2. Hyaluronate lyase [50009]
            1. Streptococcus pneumoniae [50010] (3)
              1. 1c82 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:541-814 [59081] picpic
              2. 1egu picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:541-814 [24423] picpic
              3. 1f9g picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:541-814 [59740] picpic
            2. Streptococcus agalactiae [69241] (2)
              1. 1f1s picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:620-919 [64931] picpic
              2. 1i8q picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:620-919 [66093] picpic
      3. Lactobacillus maltose phosphorylase, N-terminal domain [63732] (1)
        1. Lactobacillus maltose phosphorylase, N-terminal domain [63733] (1)
          1. Lactobacillus maltose phosphorylase, N-terminal domain [63734]
            1. Lactobacillus brevis [63735] (2)
              1. 1h54 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region a:1-268 [60635] picpic
              2. 1h54 picpic
                cl=same,cf=same,sf=74650,fa=same,dm=same,sp=same,px=same
                1. region b:1-268 [60637] picpic
    3. SH3-like barrel [50036] (1)
      1. SH3-domain [50044] (1)
        1. SH3-domain [50045] (2)
          1. c-src tyrosine kinase [50064]
            1. Human (Homo sapiens) [50065] (4)
              1. 1csk picpic
                cl=same,cf=same,sf=same,fa=same,dm=74654,sp=74658,px=same
                1. chain a [24513] picpic
              2. 1csk picpic
                cl=same,cf=same,sf=same,fa=same,dm=74654,sp=74658,px=same
                1. chain b [24514] picpic
              3. 1csk picpic
                cl=same,cf=same,sf=same,fa=same,dm=74654,sp=74658,px=same
                1. chain c [24515] picpic
              4. 1csk picpic
                cl=same,cf=same,sf=same,fa=same,dm=74654,sp=74658,px=same
                1. chain d [24516] picpic
            2. Mouse (Mus musculus) [69245] (1)
              1. 1jeg picpic
                cl=same,cf=same,sf=same,fa=same,dm=74654,sp=74655,px=same
                1. chain a [66610] picpic
  3. Alpha and beta proteins (a/b) [51349] (4)
    Mainly parallel beta sheets (beta-alpha-beta units)
    1. MurE/MurF N-terminal domain [63417] (1)
      1. MurE/MurF N-terminal domain [63418] (1)
        1. MurE/MurF N-terminal domain [63419] (2)
          1. UDP-N-acetylmuramyl tripeptide synthetase MurE [63951]
            1. Escherichia coli [63952] (2)
              1. 1e8c picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: A:3-87 -> A:3-103 [59377]
                1. region a:3-87 [59377] picpic
              2. 1e8c picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: B:2-87 -> B:2-103 [59380]
                1. region b:2-87 [59380] picpic
          2. UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF [63420]
            1. Escherichia coli [63421] (2)
              1. 1gg4 picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: A:1-81 -> A:1-98 [58985]
                1. region a:1-81 [58985] picpic
              2. 1gg4 picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: B:501-581 -> B:501-598 [58987]
                1. region b:501-581 [58987] picpic
    2. Flavodoxin-like [52171] (1)
      1. Ornithine decarboxylase N-terminal "wing" domain [52251] (1)
        1. Ornithine decarboxylase N-terminal "wing" domain [52252] (1)
          1. Ornithine decarboxylase N-terminal "wing" domain [52253]
            1. Lactobacillus sp., strain 30a [52254] (3)
              1. 1c4k picpic
                cl=same,cf=same,sf=52172,fa=same,dm=same,sp=same,px=same
                1. region a:1-107 [31273] picpic
              2. 1ord picpic
                cl=same,cf=same,sf=52172,fa=same,dm=same,sp=same,px=same
                1. region a:1-107 [31274] picpic
              3. 1ord picpic
                cl=same,cf=same,sf=52172,fa=same,dm=same,sp=same,px=same
                1. region b:1-107 [31275] picpic
    3. Glutaconate-CoA transferase subunits [53315] (1)
      1. Glutaconate-CoA transferase subunits [53316] (1)
        1. Glutaconate-CoA transferase subunits [53317] (2)
          1. Glutaconate-CoA transferase alpha [53318]
            1. Acidaminococcus fermentans [53319] (2)
              1. 1poi picpicxrefxref
                cl=same,cf=same,sf=same,fa=74656,dm=same,sp=same,px=same
                1. chain a [34153] picpic
              2. 1poi picpicxrefxref
                cl=same,cf=same,sf=same,fa=74656,dm=same,sp=same,px=same
                1. chain c [34154] picpic
          2. Glutaconate-CoA transferase beta [53320]
            1. Acidaminococcus fermentans [53321] (2)
              1. 1poi picpicxrefxref
                cl=same,cf=same,sf=same,fa=74657,dm=same,sp=same,px=same
                1. chain b [34155] picpic
              2. 1poi picpicxrefxref
                cl=same,cf=same,sf=same,fa=74657,dm=same,sp=same,px=same
                1. chain d [34156] picpic
    4. Ribokinase-like [53612] (1)
      1. MurD-like peptide ligases, catalytic domain [53623] (1)
        1. MurD/MurE/MurF [53624] (2)
          1. UDP-N-acetylmuramyl tripeptide synthetase MurE [64150]
            1. Escherichia coli [64151] (2)
              1. 1e8c picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: A:88-337 -> A:104-337 [59379]
                1. region a:88-337 [59379] picpic
              2. 1e8c picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: B:88-337 -> B:104-337 [59382]
                1. region b:88-337 [59382] picpic
          2. UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF [53627]
            1. Escherichia coli [53628] (2)
              1. 1gg4 picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: A:82-312 -> A:99-312 [58986]
                1. region a:82-312 [58986] picpic
              2. 1gg4 picpicxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: B:582-812 -> B:599-812 [58988]
                1. region b:582-812 [58988] picpic
  4. Alpha and beta proteins (a+b) [53931] (7)
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
    1. Lysozyme-like [53954] (1)
      1. Lysozyme-like [53955] (1)
        1. C-type lysozyme [53960] (1)
          1. Lysozyme [53961]
            1. Chicken (Gallus gallus) [53962] (2)
              1. 1jtp picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=53963,px=same
                1. chain l [67280] picpic
              2. 1jtp picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=53963,px=same
                1. chain m [67281] picpic
    2. RNase A-like [54075] (1)
      1. RNase A-like [54076] (1)
        1. Ribonuclease A-like [54077] (1)
          1. P-30 protein [54082]
            1. Frog (Rana pipiens) [54083] (1)
              1. 1onc picpic
                cl=same,cf=same,sf=same,fa=same,dm=54084,sp=same,px=same
    3. IL8-like [54116] (1)
      1. Chromo domain-like [54160] (1)
        1. Chromo domain [54165] (1)
          1. HP1 homologue SWI6 [54168]
            1. Fission yeast (Schizosaccharomyces pombe) [54169] (2)
              1. 1e0b picpic
                cl=same,cf=same,sf=same,fa=same,dm=54166,sp=same,px=same
                1. chain a [37476] picpic
              2. 1e0b picpic
                cl=same,cf=same,sf=same,fa=same,dm=54166,sp=same,px=same
                1. chain b [37477] picpic
    4. beta-Grasp (ubiquitin-like) [54235] (1)
      1. 2Fe-2S ferredoxin-like [54292] (1)
        1. 2Fe-2S ferredoxin-related [54293] (3)
          1. Ferredoxin VI [64229]
            1. Rhodobacter capsulatus [64230] (1)
              1. 1e9m picpic
                cl=same,cf=same,sf=same,fa=same,dm=54294,sp=same,px=same
                1. chain a [59397] picpic
          2. Putidaredoxin [54306]
            1. Pseudomonas putida [54307] (3)
              1. 1gpx picpic
                cl=same,cf=same,sf=same,fa=same,dm=54294,sp=same,px=same
              2. 1pdx picpic
                cl=same,cf=same,sf=same,fa=same,dm=54294,sp=same,px=same
                1. chain a [37682] picpic
              3. 1put picpic
                cl=same,cf=same,sf=same,fa=same,dm=54294,sp=same,px=same
          3. Terpredoxin [54308]
            1. Pseudomonas sp. [54309] (1)
              1. 1b9r picpic
                cl=same,cf=same,sf=same,fa=same,dm=54294,sp=same,px=same
                1. chain a [37683] picpic
    5. C-terminal domain of TolA [55215] (1)
      1. C-terminal domain of TolA [55216] (1)
        1. C-terminal domain of TolA [55217] (1)
          1. C-terminal domain of TolA [55218]
            1. Escherichia coli [55219] (1)
              1. 1tol picpic
                cl=same,cf=74652,sf=74653,fa=same,dm=same,sp=same,px=same
                1. region a:125-216 [39587] picpic
    6. Dimeric C-terminal domain of membrane protein TonB [64324] (1)
      1. Dimeric C-terminal domain of membrane protein TonB [64325] (1)
        1. Dimeric C-terminal domain of membrane protein TonB [64326] (1)
          1. Dimeric C-terminal domain of membrane protein TonB [64327]
            1. Escherichia coli [64328] (2)
              1. 1ihr picpic
                cl=same,cf=74652,sf=74653,fa=same,dm=same,sp=same,px=same
                1. chain a [62392] picpic
              2. 1ihr picpic
                cl=same,cf=74652,sf=74653,fa=same,dm=same,sp=same,px=same
                1. chain b [62393] picpic
    7. SH2-like [55549] (1)
      1. SH2 domain [55550] (1)
        1. SH2 domain [55551] (1)
          1. v-src tyrosine kinase [55554]
            1. Rous sarcoma virus, Schmidt-ruppin strain a [55555] (12)
              1. 1bkl picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
              2. 1bkm picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
              3. 1sha picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain a [40424] picpic
              4. 1shb picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain a [40425] picpic
              5. 1skj picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
              6. 1spr picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain a [40429] picpic
              7. 1spr picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain b [40430] picpic
              8. 1spr picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain c [40431] picpic
              9. 1spr picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain d [40432] picpic
              10. 1sps picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain a [40433] picpic
              11. 1sps picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain b [40434] picpic
              12. 1sps picpic
                cl=same,cf=same,sf=same,fa=same,dm=55556,sp=69782,px=same
                1. chain c [40435] picpic
  5. Multi-domain proteins (alpha and beta) [56572] (0)
    Folds consisting of two or more domains belonging to different classes
  6. Membrane and cell surface proteins and peptides [56835] (0)
    Does not include proteins in the immune system
  7. Small proteins [56992] (2)
    Usually dominated by metal ligand, heme, and/or disulfide bridges
    1. Kringle-like [57439] (1)
      1. Kringle-like [57440] (1)
        1. Kringle modules [57441] (1)
          1. Plasminogen kringle domains [57446]
            1. Human (Homo sapiens) [57447] (9)
              1. 1cea picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44644] picpic
              2. 1cea picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain b [44645] picpic
              3. 1ceb picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44647] picpic
              4. 1ceb picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain b [44648] picpic
              5. 1hpj picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
              6. 1hpk picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
              7. 1pkr picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
              8. 5hpg picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44642] picpic
              9. 5hpg picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain b [44643] picpic
    2. Rubredoxin-like [57769] (1)
      1. Zn-binding RNA polymerase subunits [63393] (1)
        1. RBP9 subunit of RNA polymerase II [63394] (2)
          1. RBP9 subunit of RNA polymerase II [57787]
            1. Archaeon Thermococcus celer [57788] (1)
              1. 1qyp picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
            2. Baker's yeast (Saccharomyces cerevisiae) [64575] (8)
              1. 1i3q picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:1-49 [61615] picpic
              2. 1i3q picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:50-122 [61616] picpic
              3. 1i50 picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:1-49 [61762] picpic
              4. 1i50 picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:50-122 [61763] picpic
              5. 1i6h picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:2-49 [61839] picpic
              6. 1i6h picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:50-120 [61840] picpic
              7. 1k83 picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:1-49 [68283] picpic
              8. 1k83 picpic
                cl=same,cf=same,sf=57783,fa=57784,dm=same,sp=same,px=same
                1. region i:50-122 [68284] picpic
  8. Coiled coil proteins [57942] (0)
    Not a true class
  9. Low resolution protein structures [58117] (0)
    Not a true class
  10. Peptides [58231] (0)
    Peptides and fragments. Not a true class
  11. Designed proteins [58788] (0)
    Experimental structures of proteins with essentially non-natural sequences. Not a true class
  12. Non-protein [0] (0)
    PDB entries which are theoretical models, nucleic acids, or other non-proteins
Enter search key:
Generated from scop database 1.59_1.61 history with scopm 1.100 on Fri Jan 23 17:51:43 2004
Copyright © 1994-2003 The scop authors / scop@mrc-lmb.cam.ac.uk