Structural Classification of Proteins
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Changes in domain definitions and classification
Release 1.55 ---> 1.57

Root: scop

Classes:

  1. All alpha proteins [46456] (4)
    1. Globin-like [46457] (1)
      1. Globin-like [46458] (2)
        1. Globins [46463] (1)
          1. Hemoglobin, alpha-chain [46486]
            1. Human (Homo sapiens) [46487] (4)
              1. 1cbl picpic
                cl=same,cf=same,sf=same,fa=same,dm=46500,sp=46501,px=same
                1. chain a [15314] picpic
              2. 1cbl picpic
                cl=same,cf=same,sf=same,fa=same,dm=46500,sp=46501,px=same
                1. chain c [15315] picpic
              3. 1cbm picpic
                cl=same,cf=same,sf=same,fa=same,dm=46500,sp=46501,px=same
                1. chain a [15286] picpic
              4. 1cbm picpic
                cl=same,cf=same,sf=same,fa=same,dm=46500,sp=46501,px=same
                1. chain c [15287] picpic
        2. Phycocyanins [46532] (1)
          1. C-phycocyanin [46535]
            1. Cyanobacterium (Fremyella diplosiphon) [46536] (4)
              1. 1cpc picpic
                cl=same,cf=same,sf=same,fa=same,dm=46533,sp=same,px=same
                1. chain a [15643] picpic
              2. 1cpc picpic
                cl=same,cf=same,sf=same,fa=same,dm=46533,sp=same,px=same
                1. chain b [15644] picpic
              3. 1cpc picpic
                cl=same,cf=same,sf=same,fa=same,dm=46533,sp=same,px=same
                1. chain k [15645] picpic
              4. 1cpc picpic
                cl=same,cf=same,sf=same,fa=same,dm=46533,sp=same,px=same
                1. chain l [15646] picpic
    2. DNA/RNA-binding 3-helical bundle [46688] (1)
      1. TnsA endonuclease, C-terminal domain [46781] (1)
        1. TnsA endonuclease, C-terminal domain [46782] (1)
          1. TnsA endonuclease, C-terminal domain [46783]
            1. Escherichia coli [46784] (2)
              1. 1f1z picpic
                cl=same,cf=same,sf=46785,fa=same,dm=same,sp=same,px=same
                1. region a:169-267 [16081] picpic
              2. 1f1z picpic
                cl=same,cf=same,sf=46785,fa=same,dm=same,sp=same,px=same
                1. region b:169-267 [16082] picpic
    3. Thermolysin-like metalloproteases, C-terminal domain [47900] (1)
      1. Thermolysin-like metalloproteases, C-terminal domain [47901] (1)
        1. Thermolysin-like metalloproteases, C-terminal domain [47902] (4)
          1. Elastase [47903]
            1. Pseudomonas aeruginosa [47904] (1)
              1. 1ezm picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63413,sp=55492,px=58980
                modified domain definition: 154-298 -> - [58980]
                1. region 154-298 [18230] picpic
          2. Thermolysin [47905]
            1. Bacillus thermoproteolyticus [47906] (34)
              1. 1hyt picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59005
                modified domain definition: 156-316 -> - [59005]
                1. region 156-316 [18238] picpic
              2. 1lna picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59006
                modified domain definition: E:156-316 -> E: [59006]
                1. region e:156-316 [18245] picpic
              3. 1lnb picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59007
                modified domain definition: E:156-316 -> E: [59007]
                1. region e:156-316 [18244] picpic
              4. 1lnc picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59008
                modified domain definition: E:156-316 -> E: [59008]
                1. region e:156-316 [18243] picpic
              5. 1lnd picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59009
                modified domain definition: E:156-316 -> E: [59009]
                1. region e:156-316 [18233] picpic
              6. 1lne picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59010
                modified domain definition: E:156-316 -> E: [59010]
                1. region e:156-316 [18239] picpic
              7. 1lnf picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59011
                modified domain definition: E:156-316 -> E: [59011]
                1. region e:156-316 [18237] picpic
              8. 1qf0 picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59029
                modified domain definition: A:156-316 -> A: [59029]
                1. region a:156-316 [18256] picpic
              9. 1qf1 picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59030
                modified domain definition: A:156-316 -> A: [59030]
                1. region a:156-316 [18252] picpic
              10. 1qf2 picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59031
                modified domain definition: A:156-316 -> A: [59031]
                1. region a:156-316 [18250] picpic
              11. 1thl picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59044
                modified domain definition: 156-316 -> - [59044]
                1. region 156-316 [18240] picpic
              12. 1tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59045
                modified domain definition: A:156-316 -> A: [59045]
                1. region a:156-316 [18253] picpic
              13. 1tlp picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59046
                modified domain definition: E:156-316 -> E: [59046]
                1. region e:156-316 [18260] picpic
              14. 1tlx picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59047
                modified domain definition: A:156-316 -> A: [59047]
                1. region a:156-316 [18255] picpic
              15. 1tmn picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59048
                modified domain definition: E:156-316 -> E: [59048]
                1. region e:156-316 [18251] picpic
              16. 1trl picpic
                cl=58231,cf=63387,sf=63388,fa=63389,dm=63390,sp=63391,px=same
                1. chain a [18263] picpic
              17. 1trl picpic
                cl=58231,cf=63387,sf=63388,fa=63389,dm=63390,sp=63391,px=same
                1. chain b [18264] picpic
              18. 2tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59053
                modified domain definition: A:156-316 -> A: [59053]
                1. region a:156-316 [18246] picpic
              19. 2tlx picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59054
                modified domain definition: A:156-316 -> A: [59054]
                1. region a:156-316 [18232] picpic
              20. 2tmn picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59055
                modified domain definition: E:156-316 -> E: [59055]
                1. region e:156-316 [18235] picpic
              21. 3tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59062
                modified domain definition: A:156-316 -> A: [59062]
                1. region a:156-316 [18247] picpic
              22. 3tmn picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59063
                modified domain definition: E:156-316 -> E: [59063]
                1. region e:156-316 [18242] picpic
              23. 4tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59064
                modified domain definition: A:156-316 -> A: [59064]
                1. region a:156-316 [18248] picpic
              24. 4tln picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59065
                modified domain definition: 156-316 -> - [59065]
                1. region 156-316 [18261] picpic
              25. 4tmn picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59066
                modified domain definition: E:156-316 -> E: [59066]
                1. region e:156-316 [18241] picpic
              26. 5tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59067
                modified domain definition: A:156-316 -> A: [59067]
                1. region a:156-316 [18254] picpic
              27. 5tln picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59068
                modified domain definition: 156-316 -> - [59068]
                1. region 156-316 [18262] picpic
              28. 5tmn picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59069
                modified domain definition: E:156-316 -> E: [59069]
                1. region e:156-316 [18236] picpic
              29. 6tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59070
                modified domain definition: A:156-316 -> A: [59070]
                1. region a:156-316 [18257] picpic
              30. 6tmn picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59071
                modified domain definition: E:156-316 -> E: [59071]
                1. region e:156-316 [18234] picpic
              31. 7tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59072
                modified domain definition: A:156-316 -> A: [59072]
                1. region a:156-316 [18249] picpic
              32. 7tln picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59073
                modified domain definition: 156-316 -> - [59073]
                1. region 156-316 [18259] picpic
              33. 8tli picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59074
                modified domain definition: A:156-316 -> A: [59074]
                1. region a:156-316 [18258] picpic
              34. 8tln picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63414,sp=55494,px=59075
                modified domain definition: E:156-316 -> E: [59075]
                1. region e:156-316 [18231] picpic
          3. Neutral protease [47907]
            1. Bacillus cereus, strain dsm 3101 [47908] (2)
              1. 1esp picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63415,sp=55496,px=58979
                modified domain definition: 157-317 -> - [58979]
                1. region 157-317 [18266] picpic
              2. 1npc picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63415,sp=55496,px=59012
                modified domain definition: 157-317 -> - [59012]
                1. region 157-317 [18265] picpic
          4. Aureolysin [47909]
            1. Staphylococcus aureus [47910] (1)
              1. 1bqb picpicxref
                cl=53931,cf=55485,sf=55486,fa=55490,dm=63416,sp=55498,px=58962
                modified domain definition: A:155-301 -> A: [58962]
                1. region a:155-301 [18267] picpic
    4. Pleiotropic regulator of virulence genes, SarA [48289] (1)
      1. Pleiotropic regulator of virulence genes, SarA [48290] (1)
        1. Pleiotropic regulator of virulence genes, SarA [48291] (1)
          1. Pleiotropic regulator of virulence genes, SarA [48292]
            1. Staphylococcus aureus [48293] (3)
              1. 1fzn picpic
                cl=same,cf=46688,sf=46785,fa=63379,dm=same,sp=same,px=same
                1. chain d [19006] picpic
              2. 1fzp picpic
                cl=same,cf=46688,sf=46785,fa=63379,dm=same,sp=same,px=same
                1. chain d [19007] picpic
              3. 1fzp picpic
                cl=same,cf=46688,sf=46785,fa=63379,dm=same,sp=same,px=same
                1. chain b [19008] picpic
  2. All beta proteins [48724] (8)
    1. Immunoglobulin-like beta-sandwich [48725] (1)
      1. Immunoglobulin [48726] (1)
        1. C1 set domains (antibody constant domain-like) [48942] (1)
          1. Immunoglobulin (constant domains of L and H chains) [48972]
            1. Fab C3, neutralizing type 1 poliovirus, (mouse), kappa L chain [49017] (1)
              1. 1fpt picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: L:109-213 -> L:109-214 [21084]
                1. region l:109-213 [21084] picpic
    2. Cupredoxins [49502] (1)
      1. Cupredoxins [49503] (1)
        1. Periplasmic domain of cytochrome c oxidase subunit II [49541] (1)
          1. Nitrous oxide reductase, C-terminal domain [49548]
            1. Pseudomonas nautica [49549] (6)
              1. 1qni picpic
                cl=same,cf=same,sf=same,fa=63392,dm=same,sp=same,px=same
                1. region a:451-581 [23042] picpic
              2. 1qni picpic
                cl=same,cf=same,sf=same,fa=63392,dm=same,sp=same,px=same
                1. region b:451-581 [23043] picpic
              3. 1qni picpic
                cl=same,cf=same,sf=same,fa=63392,dm=same,sp=same,px=same
                1. region c:451-581 [23044] picpic
              4. 1qni picpic
                cl=same,cf=same,sf=same,fa=63392,dm=same,sp=same,px=same
                1. region d:451-581 [23045] picpic
              5. 1qni picpic
                cl=same,cf=same,sf=same,fa=63392,dm=same,sp=same,px=same
                1. region e:451-581 [23046] picpic
              6. 1qni picpic
                cl=same,cf=same,sf=same,fa=63392,dm=same,sp=same,px=same
                1. region f:451-581 [23047] picpic
    3. PNGase F-like [49741] (2)
      1. PHM/PNGase F [49742] (1)
        1. Peptidylglycine alpha-hydroxylating monooxygenase, PHM [49746] (1)
          1. Peptidylglycine alpha-hydroxylating monooxygenase, PHM [49747]
            1. Rat (Rattus norvegicus) [49748] (3)
              1. 1opm picpic
                cl=same,cf=same,sf=same,fa=same,dm=63402,sp=same,px=59014
                cl=same,cf=same,sf=same,fa=same,dm=63402,sp=same,px=59013
                modified domain definition: A: -> A:45-198 [59013]; A:199-354 [59014]
                1. chain a [23660] picpic
              2. 1phm picpic
                cl=same,cf=same,sf=same,fa=same,dm=63402,sp=same,px=59016
                cl=same,cf=same,sf=same,fa=same,dm=63402,sp=same,px=59015
                modified domain definition: - -> 45-198 [59015]; 199-354 [59016]
              3. 3phm picpic
                cl=same,cf=same,sf=same,fa=same,dm=63402,sp=same,px=59061
                cl=same,cf=same,sf=same,fa=same,dm=63402,sp=same,px=59060
                modified domain definition: A: -> A:45-198 [59060]; A:199-354 [59061]
                1. chain a [23661] picpic
      2. Viral proteins [49749] (2)
        1. Coat protein p3 [49750] (1)
          1. Coat protein p3 [49751]
            1. Bacteriophage prd1 [49752] (9)
              1. 1cjd picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58963
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58964
                modified domain definition: A: -> A:15-244 [58963]; A:245-383 [58964]
                1. chain a [23665] picpic
              2. 1cjd picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58965
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58966
                modified domain definition: B: -> B:13-244 [58965]; B:245-384 [58966]
                1. chain b [23666] picpic
              3. 1cjd picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58967
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58968
                modified domain definition: C: -> C:16-244 [58967]; C:247-384 [58968]
                1. chain c [23667] picpic
              4. 1hqn picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58989
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58990
                modified domain definition: A: -> A:16-244 [58989]; A:245-384 [58990]
                1. chain a [23668] picpic
              5. 1hqn picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58991
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58992
                modified domain definition: B: -> B:15-244 [58991]; B:245-384 [58992]
                1. chain b [23669] picpic
              6. 1hqn picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58993
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58994
                modified domain definition: C: -> C:14-244 [58993]; C:245-385 [58994]
                1. chain c [23670] picpic
              7. 1hx6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58995
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58996
                modified domain definition: A: -> A:15-244 [58995]; A:245-384 [58996]
                1. chain a [23662] picpic
              8. 1hx6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58997
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58998
                modified domain definition: B: -> B:11-244 [58997]; B:245-384 [58998]
                1. chain b [23663] picpic
              9. 1hx6 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=58999
                cl=same,cf=same,sf=same,fa=same,dm=63403,sp=same,px=59000
                modified domain definition: C: -> C:14-244 [58999]; C:245-384 [59000]
                1. chain c [23664] picpic
        2. Adenovirus hexon [49753] (2)
          1. Adenovirus hexon [49754]
            1. Human adenovirus type 2 [49755] (1)
              1. 1dhx picpic
                cl=same,cf=same,sf=same,fa=same,dm=63404,sp=same,px=58971
                cl=same,cf=same,sf=same,fa=same,dm=63404,sp=same,px=58972
                modified domain definition: - -> 44-650 [58971]; 651-967 [58972]
            2. Human adenovirus type 5 [49756] (1)
              1. 1rux picpic
                cl=same,cf=same,sf=same,fa=same,dm=63404,sp=same,px=59040
                cl=same,cf=same,sf=same,fa=same,dm=63404,sp=same,px=59041
                modified domain definition: A: -> A:5-636 [59040]; A:637-946 [59041]
                1. chain a [23672] picpic
    4. Segmented RNA-genome viruses' proteins [49817] (1)
      1. Segmented RNA-genome viruses' proteins [49818] (1)
        1. Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [49826] (1)
          1. Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [49827]
            1. Influenza C virus [49828] (3)
              1. 1flc picpicxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: A:218-321 -> A:151-306 [23837]
                1. region a:218-321 [23837] picpic
              2. 1flc picpicxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: C:218-321 -> C:151-306 [23838]
                1. region c:218-321 [23838] picpic
              3. 1flc picpicxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: E:218-321 -> E:151-306 [23839]
                1. region e:218-321 [23839] picpic
    5. OB-fold [50198] (1)
      1. MOP-like [50331] (2)
        1. C-terminal domain of molybdate-dependent transcriptional regulator ModE [50335] (1)
          1. C-terminal domain of molybdate-dependent transcriptional regulator ModE [50336]
            1. Escherichia coli [50337] (4)
              1. 1b9m picpic
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58938
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58939
                modified domain definition: A:127-262 -> A:127-199 [58938]; A:200-262 [58939]
                1. region a:127-262 [25448] picpic
              2. 1b9m picpic
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58940
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58941
                modified domain definition: B:127-262 -> B:127-199 [58940]; B:200-262 [58941]
                1. region b:127-262 [25449] picpic
              3. 1b9n picpic
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58942
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58943
                modified domain definition: A:127-262 -> A:127-199 [58942]; A:200-262 [58943]
                1. region a:127-262 [25450] picpic
              4. 1b9n picpic
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58944
                cl=same,cf=same,sf=same,fa=same,dm=63405,sp=same,px=58945
                modified domain definition: B:127-262 -> B:127-199 [58944]; B:200-262 [58945]
                1. region b:127-262 [25451] picpic
        2. Maltose transport protein MalK, C-terminal domain [50338] (1)
          1. Maltose transport protein MalK, C-terminal domain [50339]
            1. Archaea (Thermococcus litoralis) [50340] (2)
              1. 1g29 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63406,sp=same,px=58981
                cl=same,cf=same,sf=same,fa=same,dm=63406,sp=same,px=58982
                modified domain definition: 1:241-372 -> 1:241-301 [58981]; 1:302-372 [58982]
                1. region 1:241-372 [25452] picpic
              2. 1g29 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63406,sp=same,px=58983
                cl=same,cf=same,sf=same,fa=same,dm=63406,sp=same,px=58984
                modified domain definition: 2:241-372 -> 2:241-301 [58983]; 2:302-372 [58984]
                1. region 2:241-372 [25453] picpic
    6. Reductase/isomerase/elongation factor common domain [50412] (1)
      1. Ferredoxin reductase-like, FAD-binding (N-terminal) domain [50413] (5)
        1. Reductases [50414] (10)
          1. Ferredoxin reductase (flavodoxin reductase) [50415]
            1. Spinach (Spinacia oleracea) [50416] (7)
              1. 1bx0 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:19-154 [25630] picpic
              2. 1bx1 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:19-154 [25629] picpic
              3. 1fnb picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 19-154 [25628] picpic
              4. 1fnc picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 19-154 [25627] picpic
              5. 1fnd picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 19-154 [25626] picpic
              6. 1frn picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 19-154 [25631] picpic
              7. 1frq picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:19-154 [25632] picpic
            2. Garden pea (Pisum sativum) [50417] (8)
              1. 1qfy picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:1-153 [25635] picpic
              2. 1qfy picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:514-653 [25636] picpic
              3. 1qfz picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:1-153 [25633] picpic
              4. 1qfz picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:514-653 [25634] picpic
              5. 1qg0 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:13-153 [25639] picpic
              6. 1qg0 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:1013-1153 [25640] picpic
              7. 1qga picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:1-153 [25637] picpic
              8. 1qga picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:514-653 [25638] picpic
            3. Paprika (Capsicum annuum) [50418] (2)
              1. 1fb3 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:67-207 [25641] picpic
              2. 1fb3 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:1067-1207 [25642] picpic
            4. Maize (Zea mays) [50419] (4)
              1. 1gaq picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:19-156 [25645] picpic
              2. 1gaq picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region c:19-156 [25646] picpic
              3. 1gaw picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:11-156 [25643] picpic
              4. 1gaw picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:10-156 [25644] picpic
            5. Cyanobacterium (Anabaena sp.), pcc 7119 [50420] (6)
              1. 1b2r picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:9-141 [25648] picpic
              2. 1bjk picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 9-141 [25649] picpic
              3. 1ewy picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:1-141 [25651] picpic
              4. 1ewy picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:1-141 [25652] picpic
              5. 1que picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 1-141 [25647] picpic
              6. 1quf picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 8-141 [25650] picpic
            6. Escherichia coli [50421] (1)
              1. 1fdr picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 2-100 [25653] picpic
            7. Azotobacter vinelandii [50422] (1)
              1. 1a8p picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 2-100 [25654] picpic
          2. NAD(P)H:flavin oxidoreductase [50423]
            1. Escherichia coli [50424] (4)
              1. 1qfj picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:1-97 [25655] picpic
              2. 1qfj picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:1-97 [25656] picpic
              3. 1qfj picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region c:1-97 [25657] picpic
              4. 1qfj picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region d:1-97 [25658] picpic
          3. Nitrate reductase core domain [50425]
            1. Corn (Zea mays) [50426] (3)
              1. 1cne picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 11-124 [25661] picpic
              2. 1cnf picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 11-124 [25660] picpic
              3. 2cnd picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 11-124 [25659] picpic
          4. cytochrome b5 reductase [50427]
            1. Pig (Sus scrofa), liver [50428] (1)
              1. 1ndh picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 3-125 [25662] picpic
        2. Phthalate dioxygenase reductase [50429] (1)
          1. Phthalate dioxygenase reductase [50430]
            1. Pseudomonas cepacia, db01 [50431] (1)
              1. 2pia picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region 1-103 [25663] picpic
        3. Dihydroorotate dehydrogenase B, PyrK subunit [50432] (1)
          1. Dihydroorotate dehydrogenase B, PyrK subunit [50433]
            1. Lactococcus lactis, isozyme B [50434] (3)
              1. 1ep1 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:2-102 [25665] picpic
              2. 1ep2 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:2-102 [25666] picpic
              3. 1ep3 picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:2-102 [25664] picpic
        4. Flavohemoglobin, central domain [50435] (1)
          1. Flavohemoglobin, central domain [50436]
            1. Alcaligenes eutrophus [50437] (2)
              1. 1cqx picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region a:151-261 [25667] picpic
              2. 1cqx picpic
                cl=same,cf=same,sf=63380,fa=63381,dm=same,sp=same,px=same
                1. region b:151-261 [25668] picpic
        5. NADPH-cytochrome p450 reductase-like [50438] (2)
          1. NADPH-cytochrome p450 reductase [50439]
            1. Rat (Rattus norvegicus) [50440] (2)
              1. 1amo picpic
                cl=same,cf=same,sf=63380,fa=same,dm=same,sp=same,px=same
                1. region a:243-518 [25669] picpic
              2. 1amo picpic
                cl=same,cf=same,sf=63380,fa=same,dm=same,sp=same,px=same
                1. region b:243-518 [25670] picpic
          2. Sulfite reductase flavoprotein [50441]
            1. Escherichia coli [50442] (3)
              1. 1ddg picpic
                cl=same,cf=same,sf=63380,fa=same,dm=same,sp=same,px=same
                1. region a:226-446 [25671] picpic
              2. 1ddg picpic
                cl=same,cf=same,sf=63380,fa=same,dm=same,sp=same,px=same
                1. region b:226-446 [25672] picpic
              3. 1ddi picpic
                cl=same,cf=same,sf=63380,fa=same,dm=same,sp=same,px=same
                1. region a:226-446 [25673] picpic
    7. Single-stranded right-handed beta-helix [51125] (1)
      1. Pectin lyase-like [51126] (1)
        1. Galacturonase [51137] (1)
          1. Endo-polygalacturonase II [51142]
            1. Fungus (Aspergillus niger) [51143] (2)
              1. 1czf picpic
                cl=same,cf=same,sf=same,fa=same,dm=51140,sp=63382,px=same
                1. chain a [28031] picpic
              2. 1czf picpic
                cl=same,cf=same,sf=same,fa=same,dm=51140,sp=63382,px=same
                1. chain b [28032] picpic
    8. Double-stranded beta-helix [51181] (1)
      1. cAMP-binding domain-like [51206] (1)
        1. cAMP-binding domain [51210] (1)
          1. Regulatory subunit of Protein kinase A [51213]
            1. Cow (Bos taurus) [51214] (2)
              1. 1rgs picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: 113-242 -> 113-244 [28146]
                1. region 113-242 [28146] picpic
              2. 1rgs picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: 243-376 -> 245-376 [28147]
                1. region 243-376 [28147] picpic
  3. Alpha and beta proteins (a/b) [51349] (6)
    Mainly parallel beta sheets (beta-alpha-beta units)
    1. Flavodoxin-like [52171] (1)
      1. Esterase/acetylhydrolase [52266] (1)
        1. Esterase domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [52270] (1)
          1. Esterase domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [52271]
            1. Influenza C virus [52272] (3)
              1. 1flc picpicxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: A:1-217,A:322-427 -> A:1-150,A:307-427 [31337]
                1. region a:1-217,a:322-427 [31337] picpic
              2. 1flc picpicxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: C:1-217,C:322-427 -> C:1-150,C:307-427 [31338]
                1. region c:1-217,c:322-427 [31338] picpic
              3. 1flc picpicxrefxrefxref
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=same
                modified domain definition: E:1-217,E:322-427 -> E:1-150,E:307-427 [31339]
                1. region e:1-217,e:322-427 [31339] picpic
    2. P-loop containing nucleotide triphosphate hydrolases [52539] (1)
      1. P-loop containing nucleotide triphosphate hydrolases [52540] (1)
        1. Extended AAA-ATPase domain [52700] (1)
          1. DEXX box DNA helicase [52701]
            1. Bacillus stearothermophilus, PcrA [52702] (1)
              1. 1qhg picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=59032
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=59033
                modified domain definition: A:,B:,C:,D: -> A:1-318 [59032]; A:319-651 [59033]
                1. chain a,b,c,d [32394] picpic
    3. (Phosphotyrosine protein) phosphatases II [52798] (1)
      1. (Phosphotyrosine protein) phosphatases II [52799] (1)
        1. Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain [52817] (1)
          1. Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain [52818]
            1. Human (Homo sapiens) [52819] (1)
              1. 1d5r picpic
                cl=same,cf=same,sf=same,fa=52800,dm=same,sp=same,px=same
                1. region a:14-187 [32697] picpic
    4. alpha/beta-Hydrolases [53473] (1)
      1. alpha/beta-Hydrolases [53474] (1)
        1. Bacterial lipase [53570] (2)
          1. Lipase [53571]
            1. Pseudomonas cepacia [53573] (4)
              1. 1oil picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
                1. chain a [34780] picpic
              2. 1oil picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
                1. chain b [34781] picpic
              3. 2lip picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
              4. 3lip picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
            2. Pseudomona sp., ATCC 21808 [53574] (3)
              1. 4lip picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
                1. chain e [34782] picpic
              2. 4lip picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
                1. chain d [34783] picpic
              3. 5lip picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=63399,px=same
    5. Ribokinase-like [53612] (1)
      1. MurD-like peptide ligases, catalytic domain [53623] (1)
        1. MurD/MurF [53624] (1)
          1. MurF (UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme) [53627]
            1. Escherichia coli [53628] (2)
              1. 1gg4 picpic
                cl=same,cf=63417,sf=63418,fa=63419,dm=63420,sp=63421,px=58985
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=58986
                modified domain definition: A:1-312 -> A:1-81 [58985]; A:82-312 [58986]
                1. region a:1-312 [34960] picpic
              2. 1gg4 picpic
                cl=same,cf=63417,sf=63418,fa=63419,dm=63420,sp=63421,px=58987
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=58988
                modified domain definition: B:501-812 -> B:501-581 [58987]; B:582-812 [58988]
                1. region b:501-812 [34961] picpic
    6. Thiolase-like [53900] (1)
      1. Thiolase-like [53901] (1)
        1. Thiolase-related [53902] (1)
          1. Beta-ketoacyl-ACP synthase II [53909]
            1. Synechocystis sp. [53911] (1)
              1. 1e5m picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=58974
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=58973
                modified domain definition: A: -> A:6-255 [58973]; A:256-416 [58974]
                1. chain a [35968] picpic
  4. Alpha and beta proteins (a+b) [53931] (5)
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
    1. Elongation factor Ts (EF-Ts), dimerisation domain [54712] (1)
      1. Elongation factor Ts (EF-Ts), dimerisation domain [54713] (1)
        1. Elongation factor Ts (EF-Ts), dimerisation domain [54714] (2)
          1. Elongation factor Ts (EF-Ts), dimerisation domain [54715]
            1. Escherichia coli [54716] (4)
              1. 1efu picpic
                cl=46456,cf=46928,sf=46934,fa=63423,dm=63424,sp=63425,px=58975
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=58976
                modified domain definition: B:1-139 -> B:1-54 [58975]; B:55-139 [58976]
                1. region b:1-139 [38676] picpic
              2. 1efu picpic
                cl=46456,cf=46928,sf=46934,fa=63423,dm=63424,sp=63425,px=58977
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=58978
                modified domain definition: D:1-139 -> D:1-54 [58977]; D:55-139 [58978]
                1. region d:1-139 [38678] picpic
              3. 1efu picpic
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=same
                1. region b:140-282 [38677] picpic
              4. 1efu picpic
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=same
                1. region d:140-282 [38679] picpic
            2. Thermus thermophilus [54717] (5)
              1. 1aip picpic
                cl=46456,cf=46928,sf=46934,fa=63423,dm=63424,sp=63426,px=58930
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=58931
                modified domain definition: C: -> C:2-53 [58930]; C:54-196 [58931]
                1. chain c [38681] picpic
              2. 1aip picpic
                cl=46456,cf=46928,sf=46934,fa=63423,dm=63424,sp=63426,px=58932
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=58933
                modified domain definition: D: -> D:2-53 [58932]; D:54-196 [58933]
                1. chain d [38682] picpic
              3. 1aip picpic
                cl=46456,cf=46928,sf=46934,fa=63423,dm=63424,sp=63426,px=58934
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=58935
                modified domain definition: G: -> G:2-53 [58934]; G:54-196 [58935]
                1. chain g [38683] picpic
              4. 1aip picpic
                cl=46456,cf=46928,sf=46934,fa=63423,dm=63424,sp=63426,px=58936
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=58937
                modified domain definition: H: -> H:3-53 [58936]; H:54-196 [58937]
                1. chain h [38684] picpic
              5. 1tfe picpic
                cl=same,cf=same,sf=same,fa=same,dm=63422,sp=same,px=same
    2. Zincin-like [55485] (1)
      1. Metalloproteases ("zincins"), catalytic domain [55486] (2)
        1. Thermolysin-like [55490] (4)
          1. Elastase [55491]
            1. Pseudomonas aeruginosa [55492] (1)
              1. 1ezm picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63413,sp=same,px=58980
                modified domain definition: 1-153 -> - [58980]
                1. region 1-153 [40259] picpic
          2. Thermolysin [55493]
            1. Bacillus thermoproteolyticus [55494] (32)
              1. 1hyt picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59005
                modified domain definition: 1-155 -> - [59005]
                1. region 1-155 [40268] picpic
              2. 1lna picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59006
                modified domain definition: E:1-155 -> E: [59006]
                1. region e:1-155 [40274] picpic
              3. 1lnb picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59007
                modified domain definition: E:1-155 -> E: [59007]
                1. region e:1-155 [40272] picpic
              4. 1lnc picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59008
                modified domain definition: E:1-155 -> E: [59008]
                1. region e:1-155 [40273] picpic
              5. 1lnd picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59009
                modified domain definition: E:1-155 -> E: [59009]
                1. region e:1-155 [40262] picpic
              6. 1lne picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59010
                modified domain definition: E:1-155 -> E: [59010]
                1. region e:1-155 [40267] picpic
              7. 1lnf picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59011
                modified domain definition: E:1-155 -> E: [59011]
                1. region e:1-155 [40265] picpic
              8. 1qf0 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59029
                modified domain definition: A:1-155 -> A: [59029]
                1. region a:1-155 [40285] picpic
              9. 1qf1 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59030
                modified domain definition: A:1-155 -> A: [59030]
                1. region a:1-155 [40279] picpic
              10. 1qf2 picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59031
                modified domain definition: A:1-155 -> A: [59031]
                1. region a:1-155 [40280] picpic
              11. 1thl picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59044
                modified domain definition: 1-155 -> - [59044]
                1. region 1-155 [40269] picpic
              12. 1tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59045
                modified domain definition: A:1-155 -> A: [59045]
                1. region a:1-155 [40282] picpic
              13. 1tlp picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59046
                modified domain definition: E:1-155 -> E: [59046]
                1. region e:1-155 [40289] picpic
              14. 1tlx picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59047
                modified domain definition: A:1-155 -> A: [59047]
                1. region a:1-155 [40284] picpic
              15. 1tmn picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59048
                modified domain definition: E:1-155 -> E: [59048]
                1. region e:1-155 [40281] picpic
              16. 2tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59053
                modified domain definition: A:1-155 -> A: [59053]
                1. region a:1-155 [40276] picpic
              17. 2tlx picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59054
                modified domain definition: A:1-155 -> A: [59054]
                1. region a:1-155 [40261] picpic
              18. 2tmn picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59055
                modified domain definition: E:1-155 -> E: [59055]
                1. region e:1-155 [40264] picpic
              19. 3tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59062
                modified domain definition: A:1-155 -> A: [59062]
                1. region a:1-155 [40277] picpic
              20. 3tmn picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59063
                modified domain definition: E:1-155 -> E: [59063]
                1. region e:1-155 [40270] picpic
              21. 4tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59064
                modified domain definition: A:1-155 -> A: [59064]
                1. region a:1-155 [40278] picpic
              22. 4tln picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59065
                modified domain definition: 1-155 -> - [59065]
                1. region 1-155 [40290] picpic
              23. 4tmn picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59066
                modified domain definition: E:1-155 -> E: [59066]
                1. region e:1-155 [40271] picpic
              24. 5tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59067
                modified domain definition: A:1-155 -> A: [59067]
                1. region a:1-155 [40283] picpic
              25. 5tln picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59068
                modified domain definition: 1-155 -> - [59068]
                1. region 1-155 [40291] picpic
              26. 5tmn picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59069
                modified domain definition: E:1-155 -> E: [59069]
                1. region e:1-155 [40266] picpic
              27. 6tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59070
                modified domain definition: A:1-155 -> A: [59070]
                1. region a:1-155 [40286] picpic
              28. 6tmn picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59071
                modified domain definition: E:1-155 -> E: [59071]
                1. region e:1-155 [40263] picpic
              29. 7tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59072
                modified domain definition: A:1-155 -> A: [59072]
                1. region a:1-155 [40275] picpic
              30. 7tln picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59073
                modified domain definition: 1-155 -> - [59073]
                1. region 1-155 [40288] picpic
              31. 8tli picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59074
                modified domain definition: A:1-155 -> A: [59074]
                1. region a:1-155 [40287] picpic
              32. 8tln picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63414,sp=same,px=59075
                modified domain definition: E:1-155 -> E: [59075]
                1. region e:1-155 [40260] picpic
          3. Neutral protease [55495]
            1. Bacillus cereus, strain dsm 3101 [55496] (2)
              1. 1esp picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63415,sp=same,px=58979
                modified domain definition: 1-156 -> - [58979]
                1. region 1-156 [40293] picpic
              2. 1npc picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63415,sp=same,px=59012
                modified domain definition: 1-156 -> - [59012]
                1. region 1-156 [40292] picpic
          4. Aureolysin [55497]
            1. Staphylococcus aureus [55498] (1)
              1. 1bqb picpicxref
                cl=same,cf=same,sf=same,fa=same,dm=63416,sp=same,px=58962
                modified domain definition: A:1-154 -> A: [58962]
                1. region a:1-154 [40294] picpic
        2. Matrix metalloproteases, catalytic domain [55528] (2)
          1. Gelatinase A [55534]
            1. Human (Homo sapiens) [55535] (1)
              1. 1ck7 picpic
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=58970
                cl=46456,cf=47089,sf=47090,fa=63427,dm=63428,sp=63430,px=58969
                modified domain definition: A:31-216,A:394-449 -> A:31-107 [58969]; A:108-216,A:394-449 [58970]
                1. region a:31-216,a:394-449 [40360] picpic
          2. Stromelysin-1 (MMP-3) [55536]
            1. Human (Homo sapiens), fibroblast [55537] (1)
              1. 1slm picpic
                cl=46456,cf=47089,sf=47090,fa=63427,dm=63429,sp=63431,px=59042
                cl=same,cf=same,sf=same,fa=same,dm=same,sp=same,px=59043
                modified domain definition: - -> 16-80 [59042]; 81-250 [59043]
    3. Mitochondrial processing peptidase, MPP [55993] (1)
      1. Mitochondrial processing peptidase, MPP [55994] (1)
        1. Cytochrome bc1 core subunits [55995] (4)
          1. Core 1 subunit [55996]
            1. Cow (Bos taurus) [55997] (4)
              1. 1be3 picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58950
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58951
                modified domain definition: A: -> A:1-233 [58950]; A:234-446 [58951]
                1. chain a [41400] picpic
              2. 1bgy picpicxrefxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58954
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58955
                modified domain definition: A: -> A:1-233 [58954]; A:234-446 [58955]
                1. chain a [41402] picpic
              3. 1bgy picpicxrefxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58958
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58959
                modified domain definition: M: -> M:1-233 [58958]; M:234-446 [58959]
                1. chain m [41403] picpic
              4. 1qcr picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=59025
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=59026
                modified domain definition: A: -> A:1-233 [59025]; A:234-446 [59026]
                1. chain a [41401] picpic
            2. Chicken (Gallus gallus) [55998] (3)
              1. 1bcc picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58947
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=58946
                modified domain definition: A: -> A:4-232 [58946]; A:233-445 [58947]
                1. chain a [41404] picpic
              2. 2bcc picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=59050
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=59049
                modified domain definition: A: -> A:4-232 [59049]; A:233-445 [59050]
                1. chain a [41405] picpic
              3. 3bcc picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=59057
                cl=same,cf=63410,sf=63411,fa=63412,dm=63408,sp=same,px=59056
                modified domain definition: A: -> A:4-232 [59056]; A:233-445 [59057]
                1. chain a [41406] picpic
          2. Core 2 subunit [55999]
            1. Cow (Bos taurus) [56000] (4)
              1. 1be3 picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58952
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58953
                modified domain definition: B: -> B:21-235 [58952]; B:236-439 [58953]
                1. chain b [41407] picpic
              2. 1bgy picpicxrefxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58956
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58957
                modified domain definition: B: -> B:21-235 [58956]; B:236-439 [58957]
                1. chain b [41409] picpic
              3. 1bgy picpicxrefxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58960
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58961
                modified domain definition: N: -> N:21-235 [58960]; N:236-439 [58961]
                1. chain n [41410] picpic
              4. 1qcr picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=59027
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=59028
                modified domain definition: B: -> B:17-235 [59027]; B:236-439 [59028]
                1. chain b [41408] picpic
            2. Chicken (Gallus gallus) [56001] (3)
              1. 1bcc picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58948
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=58949
                modified domain definition: B: -> B:18-235 [58948]; B:236-439 [58949]
                1. chain b [41411] picpic
              2. 2bcc picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=59051
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=59052
                modified domain definition: B: -> B:18-235 [59051]; B:236-439 [59052]
                1. chain b [41412] picpic
              3. 3bcc picpicxref
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=59058
                cl=same,cf=63410,sf=63411,fa=63412,dm=63409,sp=same,px=59059
                modified domain definition: B: -> B:18-235 [59058]; B:236-439 [59059]
                1. chain b [41413] picpic
    4. 4'-Phosphopantetheinyl transferase SFP [56213] (1)
      1. 4'-Phosphopantetheinyl transferase SFP [56214] (1)
        1. 4'-Phosphopantetheinyl transferase SFP [56215] (1)
          1. 4'-Phosphopantetheinyl transferase SFP [56216]
            1. Bacillus subtilis [56217] (1)
              1. 1qr0 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63407,sp=same,px=59038
                cl=same,cf=same,sf=same,fa=same,dm=63407,sp=same,px=59039
                modified domain definition: A: -> A:1-101 [59038]; A:102-228 [59039]
                1. chain a [41778] picpic
    5. Fumarylacetoacetate hydrolase, FAH [56528] (1)
      1. Fumarylacetoacetate hydrolase, FAH [56529] (1)
        1. Fumarylacetoacetate hydrolase, FAH [56530] (1)
          1. Fumarylacetoacetate hydrolase, FAH [56531]
            1. Mouse (Mus musculus) [56532] (8)
              1. 1hyo picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59001
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59002
                modified domain definition: A: -> A:1-118 [59001]; A:119-416 [59002]
                1. chain a [42565] picpic
              2. 1hyo picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59003
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59004
                modified domain definition: B: -> B:499-618 [59003]; B:619-917 [59004]
                1. chain b [42566] picpic
              3. 1qcn picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59017
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59018
                modified domain definition: A: -> A:1-118 [59017]; A:119-417 [59018]
                1. chain a [42571] picpic
              4. 1qcn picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59019
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59020
                modified domain definition: B: -> B:499-618 [59019]; B:619-918 [59020]
                1. chain b [42572] picpic
              5. 1qco picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59021
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59022
                modified domain definition: A: -> A:1-118 [59021]; A:119-417 [59022]
                1. chain a [42569] picpic
              6. 1qco picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59023
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59024
                modified domain definition: B: -> B:499-618 [59023]; B:619-917 [59024]
                1. chain b [42570] picpic
              7. 1qqj picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59034
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59035
                modified domain definition: A: -> A:1-118 [59034]; A:119-416 [59035]
                1. chain a [42567] picpic
              8. 1qqj picpic
                cl=48724,cf=50036,sf=63433,fa=63434,dm=63435,sp=63436,px=59036
                cl=same,cf=same,sf=same,fa=same,dm=63432,sp=same,px=59037
                modified domain definition: B: -> B:1-118 [59036]; B:119-416 [59037]
                1. chain b [42568] picpic
  5. Multi-domain proteins (alpha and beta) [56572] (0)
    Folds consisting of two or more domains belonging to different classes
  6. Membrane and cell surface proteins and peptides [56835] (1)
    Does not include proteins in the immune system
    1. Membrane all-alpha [56868] (1)
      1. Membrane all-alpha [56869] (2)
        1. Potassium chanel protein [56900] (1)
          1. Potassium chanel protein [56901]
            1. Streptomyces lividans [56902] (8)
              1. 1bl8 picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain a [43652] picpic
              2. 1bl8 picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain b [43653] picpic
              3. 1bl8 picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain c [43654] picpic
              4. 1bl8 picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain d [43655] picpic
              5. 1f6g picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain a [43656] picpic
              6. 1f6g picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain b [43657] picpic
              7. 1f6g picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain c [43658] picpic
              8. 1f6g picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain d [43659] picpic
        2. Gated mechanosensitive channel [56903] (1)
          1. Gated mechanosensitive channel [56904]
            1. Mycobacterium tuberculosis [56905] (5)
              1. 1msl picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain a [43660] picpic
              2. 1msl picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain b [43661] picpic
              3. 1msl picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain c [43662] picpic
              4. 1msl picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain d [43663] picpic
              5. 1msl picpic
                cl=same,cf=same,sf=same,fa=63383,dm=same,sp=same,px=same
                1. chain e [43664] picpic
  7. Small proteins [56992] (4)
    Usually dominated by metal ligand, heme, and/or disulfide bridges
    1. Defensin-like [57391] (1)
      1. Defensin-like [57392] (1)
        1. Defensin [57393] (2)
          1. Beta-defensin 2 [57396]
            1. Human (Homo sapiens) [57397] (20)
              1. 1fd3 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain a [44572] picpic
              2. 1fd3 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain b [44573] picpic
              3. 1fd3 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain c [44574] picpic
              4. 1fd3 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain d [44575] picpic
              5. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain a [44576] picpic
              6. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain b [44577] picpic
              7. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain c [44578] picpic
              8. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain d [44579] picpic
              9. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain e [44580] picpic
              10. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain f [44581] picpic
              11. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain g [44582] picpic
              12. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain h [44583] picpic
              13. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain i [44584] picpic
              14. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain j [44585] picpic
              15. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain k [44586] picpic
              16. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain l [44587] picpic
              17. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain m [44588] picpic
              18. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain n [44589] picpic
              19. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain o [44590] picpic
              20. 1fd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63385,px=same
                1. chain p [44591] picpic
          2. Beta-defensin 12 [57398]
            1. Cow (Bos taurus) [57399] (1)
              1. 1bnb picpic
                cl=same,cf=same,sf=same,fa=same,dm=63384,sp=63386,px=same
    2. Kringle-like [57439] (1)
      1. Kringle-like [57440] (1)
        1. Kringle modules [57441] (2)
          1. Plasminogen kringle 4 [57442]
            1. Human (Homo sapiens) [57443] (8)
              1. 1krn picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
              2. 1pk4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
              3. 1pmk picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44635] picpic
              4. 1pmk picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain b [44636] picpic
              5. 1pml picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44632] picpic
              6. 1pml picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain b [44633] picpic
              7. 1pml picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain c [44634] picpic
              8. 2pk4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
          2. Plasminogen kringle 2 [57444]
            1. Human (Homo sapiens) [57445] (5)
              1. 1b2i picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44640] picpic
              2. 1pk2 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
              3. 1tpk picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain a [44637] picpic
              4. 1tpk picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain b [44638] picpic
              5. 1tpk picpic
                cl=same,cf=same,sf=same,fa=same,dm=63400,sp=63401,px=same
                1. chain c [44639] picpic
    3. Cystine-knot cytokines [57500] (1)
      1. Cystine-knot cytokines [57501] (1)
        1. Gonadotropin, A and B chains [57528] (1)
          1. Gonadotropin, A and B chains [57529]
            1. Human (Homo sapiens) [57530] (8)
              1. 1dz7 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63395,sp=63397,px=same
                1. chain a [44815] picpic
              2. 1hcn picpic
                cl=same,cf=same,sf=same,fa=same,dm=63395,sp=63397,px=same
                1. chain a [44809] picpic
              3. 1hcn picpic
                cl=same,cf=same,sf=same,fa=same,dm=63396,sp=63398,px=same
                1. chain b [44810] picpic
              4. 1hd4 picpic
                cl=same,cf=same,sf=same,fa=same,dm=63395,sp=63397,px=same
                1. chain a [44816] picpic
              5. 1hrp picpic
                cl=same,cf=same,sf=same,fa=same,dm=63395,sp=63397,px=same
                1. chain a [44811] picpic
              6. 1hrp picpic
                cl=same,cf=same,sf=same,fa=same,dm=63396,sp=63398,px=same
                1. chain b [44812] picpic
              7. 1qfw picpic
                cl=same,cf=same,sf=same,fa=same,dm=63395,sp=63397,px=same
                1. chain a [44813] picpic
              8. 1qfw picpic
                cl=same,cf=same,sf=same,fa=same,dm=63396,sp=63398,px=same
                1. chain b [44814] picpic
    4. Rubredoxin-like [57769] (1)
      1. Zinc beta-ribbon [57783] (1)
        1. Transcriptional factor domain [57784] (1)
          1. Rbp9 subunit of RNA polymerase II, C-terminal domain [57787]
            1. Thermococcus celer [57788] (1)
              1. 1qyp picpic
                cl=same,cf=same,sf=63393,fa=63394,dm=same,sp=same,px=same
  8. Coiled coil proteins [57942] (0)
    Not a true class
  9. Low resolution protein structures [58117] (0)
    Not a true class
  10. Peptides [58231] (0)
    Peptides and fragments. Not a true class
  11. Designed proteins [58788] (0)
    Experimental structures of proteins with essentially non-natural sequences. Not a true class
  12. Non-protein [0] (0)
    PDB entries which are theoretical models, nucleic acids, or other non-proteins
Enter search key:
Generated from scop database 1.55_1.57 history with scopm 1.100 on Mon Jan 26 19:10:26 2004
Copyright © 1994-2003 The scop authors / scop@mrc-lmb.cam.ac.uk