Structural Classification of Proteins




Fold: Ferredoxin-like
- alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Lineage:
- Root: scop
- Class: Alpha and beta proteins (a+b)
Mainly antiparallel beta sheets (segregated alpha and beta regions)
- Fold: Ferredoxin-like
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamilies:
- 4Fe-4S ferredoxins (5)

- Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain (1)


- Protease propeptides (2)

- Muconalactone isomerase (1)

- Prokaryotic signal transducing protein (1)

- Nucleoside diphosphate kinases (1)

- RNA-binding domain, RBD (2)

- Viral DNA-binding domain (1)

- RuBisCO, large subunit, small (N-terminal) domain (1)

C-terminal domain is beta/alpha barrel
- Acylphosphatase (1)


- Elongation factor G (EF-G), domains III and V (1)

- eEF-1beta-like (1)

- Anticodon-binding domain of PheRS (1)

- Ribosomal protein S6 (1)


- Ribosomal protein S10 (1)

- Poly(A) polymerase, C-terminal domain (1)

- Metal-binding domain (1)

- Regulatory domain in the aminoacid metabolism (3)

- Carboxypeptidase G2, dimerisation domain (1)

- NAD-binding domain of HMG-CoA reductase (1)

- Molybdenum cofactor biosynthesis protein C, MoaC (1)

- TRADD, N-terminal domain (1)

- Probable ACP-binding domain of malonyl-CoA ACP transacylase (1)


- CheY-binding domain of CheA (1)

- Killer toxin KP6 alpha-subunit (1)

- Homoserine kinase, C-terminal domain (1)

common fold is elaborated with additional secondary structures
- Translational regulator protein regA (1)


common fold is elaborated with additional secondary structures
- Peptide methionine sulfoxide reductase (1)

common fold is elaborated with additional secondary structures
- Adenylyl and guanylyl cyclase catalytic domain (1)

common fold is elaborated with additional secondary structures
- 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK (1)

common fold is elaborated with additional secondary structures
- Methyl-coenzyme M reductase subunits (2)

each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
- FAD-linked oxidases, C-terminal domain (2)

duplication: contains two subdomains of this fold
- Formylmethanofuran:tetrahydromethanopterin formyltransferase (1)

duplication: contains two subdomains of this fold
- Formiminotransferase domain of formiminotransferase-cyclodeaminase. (1)

duplication: contains two subdomains of this fold
- Pseudouridine synthase I (1)

duplication: contains two subdomains of this fold
- Sulfite reductase, domains 1 and 3 (1)

duplication: contains two subdomains of this fold
Generated from scop database 1.55 with scopm 1.095 on Mon Jul 9 18:35:50 2001
Copyright
© 1994-2001 The scop authors /
scop@mrc-lmb.cam.ac.uk