Fold: Peptide deformylase

alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b)
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Peptide deformylase
   alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix

Superfamilies:

1. Peptide deformylase (1)
   nickel-dependent enzyme
   1. Peptide deformylase (1)
      1. Peptide deformylase
         1. Escherichia coli (12)
            1. 1bsz
               complexed with 2pe, of1, so4
               1. chain a
               2. chain b
               3. chain c
            2. 1icj
               complexed with ni, pgo, so4
               1. chain a
               2. chain b
               3. chain c
            3. 1bs4
               complexed with 2pe, so4, zn3
               1. chain a
               2. chain b
               3. chain c
            4. 1bs6
               complexed with ni1, ni2, so4
               1. chain a
               2. chain b
               3. chain c
            5. 1bs8
               complexed with so4, zn3, zno
               1. chain a
               2. chain b
               3. chain c
            6. 1bs5
               complexed with so4, zn3
               1. chain a
               2. chain b
               3. chain c
            7. 1bs7
               complexed with ni1, so4
               1. chain a
               2. chain b
               3. chain c
            8. 1bsj
               complexed with co, mln, po4
               1. chain a
            9. 1bsk
               complexed with mln, po4, zn
               1. chain a
            10. 1dff
                complexed with zn
            11. 2def
                complexed with ni; mutant
            12. 1def
                incorrect model(?)
                complexed with zn