Structural Classification of Proteins




Fold: Phosphorylase/hydrolase-like
- core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
Lineage:
- Root: scop
- Class: Alpha and beta proteins (a/b)
Mainly parallel beta sheets (beta-alpha-beta units)
- Fold: Phosphorylase/hydrolase-like
core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
Superfamilies:
- Hydrogenase maturating endopeptidase HybD (1)

the fold coincides with the consensus core structure
- Purine and uridine phosphorylases (1)

complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
- Peptidyl-tRNA hydrolase (1)

- Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) (1)

- Zn-dependent exopeptidases (5)


core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
- LigB subunit of an aromatic-ring-opening dioxygenase LigAB (1)

circular permutation of the common fold, most similar to the PNP fold
Generated from scop database 1.55 with scopm 1.095 on Mon Jul 9 18:35:50 2001
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© 1994-2001 The scop authors /
scop@mrc-lmb.cam.ac.uk