Class: Peptides

Peptides and fragments

Lineage:

1. Root: scop
2. Class: Peptides
   Peptides and fragments

Folds:

1. Membrane ion channel-forming peptide antibiotics containing D-aminoacids (1)
2. Lantibiotic peptides (1)
   peptide antibiotic
3. Antimicrobial beta-hairpin (1)
   contains beta-hairpin crosslinked by disulphide bridge(s)
4. Antimicrobial helix (1)
   antibiotic peptide
5. Microcin J25 (1)
   mycrocyclic antimicrobial peptide; bacteriocin
6. Peptide hormones (1)
   contains one alpha-helix
7. delta-Toxin (1)
8. PSP1-like (1)
9. Arg-rich RNA binding peptides (6)
10. DNA-binding domains of HMG-I(Y) (1)
11. VPR protein fragments (1)
12. Inactivation gate of potassium and sodium channels (1)
13. Coagulation factor VIII, membrane-binding peptide (1)
14. Phosphocholine cytidylyltransferase membrane-binding peptides (1)
15. Parathyroid hormone fragments (residues between 1 and 39) (1)
16. Corticotropin releasing factor (1)
17. Liposaccharide-binding protein CAP18 (residues 106-137) (1)
18. Polymorphic antigen SPAM-H1 (residues 90-127) (1)
19. Mellitin (1)
20. Tertiapin (1)
    small disulphide-rich peptide
21. Antifreeze polypeptide HPLC-6 (1)
22. Troponin I fragments (1)
23. Pilin fragments (1)
24. RP71935 (1)
25. Atrial natriuretic peptide (1)
26. Compstatin (1)
27. Membrane-bound antimicrobial peptides (1)
28. Endothelin-like (1)
    small disulphide-rich
29. Heat-stable enterotoxin (HSE) (1)
30. Conotoxins (1)
    disulphide-rich fold
31. Conantokin (1)
32. Contryphan-R (1)
33. Immunodominant region of protein G of BRSV (1)
    hairpin of two short helices crosslinked with two disulphides
34. Bradykinin antagonist B-9340 (1)
35. Transmembrane helical fragments (1)
36. Topogenic peptides (3)
37. Phospholamban fragments (1)
38. Fragment of bowman-birk inhibitor (1)
39. Fragments of apolipoproteins (1)
40. Transactivation protein TAT (1)
41. Proline pipe (1)
42. Amyloid peptides (1)
43. Gelsolin fragment (residues 150-169) (1)
44. Acetylcholine receptor fragment (residues alpha 67-76) (1)
45. Thrombomodulin EGF domain fragment (residues 409-426) (1)
46. MoMLV p15 fragment (residues 409-426) (1)
47. Capsid protein major homology region peptide analog (1)
48. CD4 receptor peptide, res. 403-419 (1)
49. Heparin binding site of non collagenous domain I (nc1) of collagen facit xiv (1)
50. GroES, fragment of mobile loop (1)
51. cAMP and cGMP phosphodiesterase (PDE) fragments (1)
52. HIV-1 Nef protein fragments (1)
53. HIV-1 envelope gp120 protein concensus V3 loop peptide (1)
54. Hepatitis C virus N-terminal capsid protein fragment 2-45 (1)
55. P27(KIP1) fragment 22-106 (1)
56. Transducin alpha-1 subunit rhodopsin binding domain (res. 340-350) (1)
57. alpha-lactalbumin peptide model (1)
58. Coat protein-binding domain of bacteriophage p22 scaffolding protein (1)
59. Immunoreceptor tyrosine kinase activation motif, ITAM (1)
60. Cytoplasmic domain of the integrin alpha-iib subunit (1)
61. Human glutathione reductase (HGR) inhibitor (1)
62. Small subunit C-terminal inhibitory peptide of ribonucleotide reductase (1)
63. Histone H3 C-terminal fragment 130-135 (1)
64. Smad-binding domain of Sara (1)
65. Peptide derived from p-21 activated kinase (1)
66. pak1 autoregulatory domain (1)
67. Translocated intimin receptor (tir) intimin-binding domain (1)
68. Fragment 671-690 of the rabbit skeletal dihydropyridine receptor (1)
69. C-terminal negative regulatory domain of p53 (1)
70. FxFG nucleoporin repeats (1)
71. TCF3-CBD (catenin-binding domain) (1)
72. Synaptobrevin-II fragments (1)
73. VMIP-II fragment (1)
74. Papillomavirus e6-interacting peptide of e6ap (1)
75. Isolated insulin B-chain (1)
76. N-terminal hairpin of ubiquitin (residues 1-17) (1)
77. alpha-helical hairpin of p8mtcp1 (1)