Structural Classification of Proteins
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Superfamily: DNA polymerase beta, N-terminal (8 kD)-domain

contains one classic and one pseudo HhH motifs

Lineage:

  1. Root: scop
  2. Class: All alpha proteins
  3. Fold: SAM domain-like
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: DNA polymerase beta, N-terminal (8 kD)-domain
    contains one classic and one pseudo HhH motifs

Families:

  1. DNA polymerase beta, N-terminal (8 kD)-domain (2)
    1. DNA polymerase beta, N-terminal (8 kD)-domain
      topologically similar to the second domain
      1. Human (Homo sapiens) (90)
        1. 1bpy seqndbxref
          protein/DNA complex; complexed with dct, doc, mg, na
          1. region a:10-91
        2. 1zqa seqndbxref
          protein/DNA complex; complexed with k
          1. region a:9-91
        3. 9icw seqndbxref
          protein/DNA complex; complexed with na, so4
          1. region a:9-91
        4. 8ico seqndbxref
          protein/DNA complex; complexed with azt, mn, na
          1. region a:9-91
        5. 9ick seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        6. 9icx seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        7. 7ici seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        8. 7ice seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        9. 7icn seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        10. 8ick seqndbxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:9-91
        11. 1zqi seqndbxref
          protein/DNA complex; complexed with k
          1. region a:9-91
        12. 1zqp seqndbxref
          protein/DNA complex; complexed with k
          1. region a:9-91
        13. 7icv seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        14. 7ick seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        15. 9icl seqndbxref
          protein/DNA complex; complexed with mn, na
          1. region a:9-91
        16. 9ico seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        17. 9icv seqndbxref
          protein/DNA complex; complexed with dtp, na, zn
          1. region a:9-91
        18. 8icc seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        19. 8ici seqndbxref
          protein/DNA complex; complexed with mg, na
          1. region a:9-91
        20. 8icn seqndbxref
          protein/DNA complex; complexed with atp, mn, na
          1. region a:9-91
        21. 7ich seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        22. 9icm seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        23. 7icq seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        24. 7ict seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        25. 9icn seqndbxref
          protein/DNA complex; complexed with dct, mg, na
          1. region a:9-91
        26. 7icp seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        27. 8icp seqndbxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:9-91
        28. 8icr seqndbxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:9-91
        29. 8ics seqndbxref
          protein/DNA complex; complexed with dcp, mn, na
          1. region a:9-91
        30. 7icm seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        31. 9icq seqndbxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:9-91
        32. 9icr seqndbxref
          protein/DNA complex; complexed with dcp, mn, na
          1. region a:9-91
        33. 9ics seqndbxref
          protein/DNA complex; complexed with dct, mn, na
          1. region a:9-91
        34. 9ict seqndbxref
          protein/DNA complex; complexed with dgt, mn, na
          1. region a:9-91
        35. 9icu seqndbxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:9-91
        36. 8icq seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        37. 7icr seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        38. 7icg seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        39. 1zqb seqndbxref
          protein/DNA complex; complexed with ba
          1. region a:9-91
        40. 1zqk seqndbxref
          protein/DNA complex; complexed with k
          1. region a:9-91
        41. 7icl seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        42. 8ica seqndbxref
          protein/DNA complex; complexed with ca, dtp, na
          1. region a:9-91
        43. 8icb seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        44. 8icm seqndbxref
          protein/DNA complex; complexed with na, so4
          1. region a:9-91
        45. 8icx seqndbxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:9-91
        46. 8icz seqndbxref
          protein/DNA complex; complexed with na, so4
          1. region a:9-91
        47. 9ica seqndbxref
          protein/DNA complex; complexed with mn, stp
          1. region a:9-91
        48. 9icf seqndbxref
          protein/DNA complex; complexed with dtp, na, zn
          1. region a:9-91
        49. 9icg seqndbxref
          protein/DNA complex; complexed with dcp, na, zn
          1. region a:9-91
        50. 9ich seqndbxref
          protein/DNA complex; complexed with dgt, na, zn
          1. region a:9-91
        51. 9icj seqndbxref
          protein/DNA complex; complexed with na, so4
          1. region a:9-91
        52. 7icf seqndbxref
          protein/DNA complex; complexed with cd, na
          1. region a:9-91
        53. 1zqg seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        54. 1zqm seqndbxref
          protein/DNA complex; complexed with mn
          1. region a:9-91
        55. 1zqn seqndbxref
          protein/DNA complex; complexed with ba
          1. region a:9-91
        56. 1zqf seqndbxref
          protein/DNA complex; complexed with cs
          1. region a:9-91
        57. 7ics seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        58. 8icf seqndbxref
          protein/DNA complex; complexed with dtp, na
          1. region a:9-91
        59. 8icg seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        60. 8icl seqndbxref
          protein/DNA complex; complexed with dtp, na, ni
          1. region a:9-91
        61. 8icu seqndbxref
          protein/DNA complex; complexed with dad, mn, na
          1. region a:9-91
        62. 9icb seqndbxref
          protein/DNA complex; complexed with co, dtp, na
          1. region a:9-91
        63. 9icc seqndbxref
          protein/DNA complex; complexed with cr, dtp, na
          1. region a:9-91
        64. 1zqo seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        65. 7ico seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        66. 8icj seqndbxref
          protein/DNA complex; complexed with na, ttp
          1. region a:9-91
        67. 8ict seqndbxref
          protein/DNA complex; complexed with dcp, mn, na
          1. region a:9-91
        68. 8icv seqndbxref
          protein/DNA complex; complexed with dgt, mn, na
          1. region a:9-91
        69. 8icy seqndbxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:9-91
        70. 9ici seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        71. 9icy seqndbxref
          protein/DNA complex; complexed with na, so4
          1. region a:9-91
        72. 1zqc seqndbxref
          protein/DNA complex; complexed with ca
          1. region a:9-91
        73. 1zqd seqndbxref
          protein/DNA complex; complexed with ca
          1. region a:9-91
        74. 1zql seqndbxref
          protein/DNA complex; complexed with mn
          1. region a:9-91
        75. 1zqq seqndbxref
          protein/DNA complex; complexed with mn, na
          1. region a:9-91
        76. 1zqs seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        77. 7icu seqndbxref
          protein/DNA complex; complexed with cd, na
          1. region a:9-91
        78. 8ice seqndbxref
          protein/DNA complex; complexed with cd, dtp, na
          1. region a:9-91
        79. 1bpz seqndbxref
          protein/DNA complex; complexed with na
          1. region a:5-91
        80. 9icp seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        81. 1bpx seqndbxref
          protein/DNA complex; complexed with na
          1. region a:5-91
        82. 8icw seqndbxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:9-91
        83. 8ich seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        84. 7icj seqndbxref
          protein/DNA complex; complexed with cu, na
          1. region a:9-91
        85. 1zqt seqndbxref
          protein/DNA complex; complexed with na, zn
          1. region a:9-91
        86. 1zqe seqndbxref
          protein/DNA complex; complexed with cr
          1. region a:9-91
        87. 1zqr seqndbxref
          protein/DNA complex; complexed with na, ni
          1. region a:9-91
        88. 9ice seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
        89. 1zqj seqndbxref
          protein/DNA complex; complexed with ca
          1. region a:9-91
        90. 1zqh seqndbxref
          protein/DNA complex; complexed with na
          1. region a:9-91
      2. Rat (Rattus norvegicus) (9)
        1. 2bpf seqndbxref
          protein/DNA complex; complexed with dct, mg
          1. region a:9-91
        2. 1cf6 seqndbxref
          complexed with cr, ucp
          1. region a:10-91
          2. region b:10-91
        3. 1bpd seqxref
          complexed with po4
          1. region 9-91
        4. 2bpg seqndbxref
          protein/DNA complex; complexed with dct, mg
          1. region a:9-91
          2. region b:9-91
        5. 1bpe seqxref
          partly disordered
          complexed with dtp
          1. region 12-91
        6. 1dk3 seq
          1. chain a
        7. 1dk2 seq
          1. chain a
        8. 1bno seq
        9. 1bnp seq
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Generated from scop database 1.55 with scopm 1.095 on Mon Jul 9 18:35:50 2001
Copyright © 1994-2001 The scop authors / scop@mrc-lmb.cam.ac.uk