Structural Classification of Proteins




Family: Calmodulin-like
- Duplication: made with two pairs of EF-hands
Lineage:
- Root: scop
- Class: All alpha proteins
- Fold: EF Hand-like
core: 4 helices; array of 2 hairpins, opened
- Superfamily: EF-hand
Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
- Family: Calmodulin-like
Duplication: made with two pairs of EF-hands
Protein Domains:
- Troponin C
- Chicken (Gallus gallus) (21)

- Turkey (Meleagris gallopavo) (2)

- Rabbit (Oryctolagus cuniculus) (4)

- Chicken (Gallus gallus), cardiac isoform (1)

- Human (Homo sapiens), cardiac isoform (3)

- Sarcoplasmic calcium-binding protein
- Sandworm (Nereis diversicolor) (1)


- Amphioxus (Branchiostoma lanceolatum) (1)

- Aequorin
structurally most similar to sarcoplasmic calcium-binding protein
- Jellyfish (Aequorea aequorea) (1)

- Calcium vector protein
- Amphioxus (Branchiostoma lanceolatum) (2)

- Calmodulin
- Human (Homo sapiens) (2)

- Cow (Bos taurus) (13)

- Rat (Rattus rattus) (1)


- Chicken (Gallus gallus) (1)

mutant with a two residue deletion in the central helix
- African frog (Xenopus laevis) (8)

- Drosophila melanogaster (3)


- Ciliate (Paramecium tetraurelia) (3)

- Myosin Essential Chain
- Bay scallop (Aequipecten irradians) (5)

- Chicken (Gallus gallus) (3)

- Myosin Regulatory Chain
- Bay scallop (Aequipecten irradians) (5)

- Chicken (Gallus gallus) (1)

- Calcineurin regulatory subunit (B-chain)
- Cow (Bos taurus) (1)

- Human (Homo sapiens) (1)

- Recoverin
Calcium-myristoyl switch; only one EF-hand is functional
- Cow (Bos taurus) (3)

- Frequenin
- Baker's yeast (Saccharomyces cerevisiae) (1)

- Guanylate cyclase activating protein 2, GCAP-2
- Cow (Bos taurus) (1)

- Neurocalcin
- Cow (Bos taurus) (1)

- Calium- and integrin-binding protein, CIB
- Human (Homo sapiens) (2)

Generated from scop database 1.55 with scopm 1.095 on Mon Jul 9 18:35:50 2001
Copyright
© 1994-2001 The scop authors /
scop@mrc-lmb.cam.ac.uk