Structural Classification of Proteins




Fold: Four-helical up-and-down bundle
- core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
Lineage:
- Root: scop
- Class: All alpha proteins
- Fold: Four-helical up-and-down bundle
core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
Superfamilies:
- Apolipoprotein (1)


- Aspartate receptor, ligand-binding domain (1)

- Cytochromes (2)


Heme-containing proteins
- Hemerythrin (1)


- TMV-like viral coat proteins (1)

- Acyl-CoA dehydrogenase (flavoprotein), C-terminal domain (1)

- FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) (1)

- Proteasome activator reg(alpha) (1)

- alpha-catenin/vinculin (1)

- Histidine-containing phosphotransfer domain, HPT domain (2)

contains additional, fifth helix at the N-terminus
- Bacterial GAP domain (1)

contains extra helices in the loops at one end of the bundle
Generated from scop database 1.55 with scopm 1.095 on Mon Jul 9 18:35:50 2001
Copyright
© 1994-2001 The scop authors /
scop@mrc-lmb.cam.ac.uk