Structural Classification of Proteins
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Structural Classification of Proteins

Welcome to SCOP: Structural Classification of Proteins. 1.50 release.
10650 PDB Entries (29 Feb 2000). 45 Literature References. 24186 Domains (excluding nucleic acids and theoretical models). Folds, superfamilies, and families statistics here.

Authors. Alexey G. Murzin, Loredana Lo Conte, Bartlett G. Ailey, Steven E. Brenner, Tim J. P. Hubbard, and Cyrus Chothia.

MRC Laboratory of Molecular Biology and Centre for Protein Engineering
Hills Road, Cambridge, CB2 2QH, England. scop@mrc-lmb.cam.ac.uk

Reference: Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995). SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol. 247, 536-540.

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Warning Renaming of ' ' chains as 'A' chains in PDB files introduces inconsistencies with respect to PDB files in all aspects of SCOP that depend on the chain identifier (SCOP domain definition/identifiers, ASTRAL domain sequences, rasmol images, etc)

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Synopsis

Nearly all proteins have structural similarities with other proteins and, in some of these cases, share a common evolutionary origin. The SCOP database, created by manual inspection and abetted by a battery of automated methods, aims to provide a detailed and comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known. As such, it provides a broad survey of all known protein folds, detailed information about the close relatives of any particular protein, and a framework for future research and classification.

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April 2000